| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2878 |
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| Symbol | |
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| ID | 4809085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3403324 |
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| End bp | 3404217 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640108297 |
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| Product | peptidase C39, bacteriocin processing |
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| Protein accession | YP_001039269 |
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| Protein GI | 125975359 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0648351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTTA ACCGTGCAAT ATTTCCGGCT GTAATAATCG GCATTATACT TTTTATTATA
GGGCAAAGAA CCTCAAGGGC GGTGAGCGGA AAACCCGTCA GGATTCTTTT GGGTTTTGTG
TTCATCCTCC TTTGTATTCC AAACTTTCTG TTTGGGGCAT ATTACATGCA TTTTATAAAT
GAACCTGTAT GGTATATTAA ATTTAGGGCG ATTGACAATA TTGAGTTGTT ATCATTCCTG
ACAGGTCTTT TCTTTGGATT TGTAACTTTC AAAGATGAAA GCTTTGGGAA AATTAAGTTA
AAAGTTTTTA ATAAATATAT ATTCGTTATC TGCATGCTTT TAATTATAGT ACCTTTTATT
AAACCGATTA TAAGACCTGT AAGCCGGAAT TCTCAGTTTC AAGACCGATG GAAAGATGGG
GTGTGTTTGC AATCTACAGG TTCAACTTGC GGTCCTGCAG CATTAGCGAC AATTTTTAAT
TATTATGGAA TATCAAAAAG TGAAGAAGAG ATTGCAAGGG CAGCCTTTTC CAGTTCAAGC
GGTACGGAGA ATTGGTATTT AATCAGGTAT GCGGAAAAGA ACGGACTCGA AACTGAAGTT
TCATACAAAA ACAGTTTGAA CGATGTACCG GTACCGTCAA TAATCGGAAC TTATATTAAC
GGCAGGATAG GCCACTTTAT AACGATTTTA GGCAAAGAAG GAGACCATTT TGTTGTCGGA
GATTCTTTAA AAGGCAGATT ACTGTTAACC GAAAAGGAGT TTAATAAATA CTATACTTTT
TCAAATTTTG TTTTGCACAT AAAAAAGCCG GAGGATTTAT ATTCTTCAAA GATGAAGCCC
GGGAATGGAG AGACAGAAGG CAACTTCGAT ACGGAAAATA CGGATGATAC TTAA
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| Protein sequence | MYFNRAIFPA VIIGIILFII GQRTSRAVSG KPVRILLGFV FILLCIPNFL FGAYYMHFIN
EPVWYIKFRA IDNIELLSFL TGLFFGFVTF KDESFGKIKL KVFNKYIFVI CMLLIIVPFI
KPIIRPVSRN SQFQDRWKDG VCLQSTGSTC GPAALATIFN YYGISKSEEE IARAAFSSSS
GTENWYLIRY AEKNGLETEV SYKNSLNDVP VPSIIGTYIN GRIGHFITIL GKEGDHFVVG
DSLKGRLLLT EKEFNKYYTF SNFVLHIKKP EDLYSSKMKP GNGETEGNFD TENTDDT
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