Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2734 |
Symbol | |
ID | 4810236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3225714 |
End bp | 3226553 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640108153 |
Product | VanW |
Protein accession | YP_001039126 |
Protein GI | 125975216 |
COG category | [V] Defense mechanisms |
COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACAAA AAAACGGGTT GAAGGAGATT TTTGCAGTTG CTACGACGAT TTTCATTGCG GTTTTGAGTG TGAGCTGCAG CTTTGGTGAG AGAAAAGTGG AGAATAATGT TTATATAAAA GATATAAATG TCGGCGGAAA AAGCAAAGCC GAGGTTGAAG AAATTATCAA AAAGATGTCA GACAGTATTG ATGTGGAACC AAAGGATGCG ATATTAAACG AGGATACCCT TGAGATTGCA CCGGAGGAGC CAGGCAGAAA ACTTAATGTT GAAAGTACCC TGAAAGCCGT TCTTAACGCA AAAGAAGGGG ATAGAATAGA ACCTGTTGTT GAAGAAGTAT TGCCTAAAAT AACGCGGGAA GATGTGGAAA AAAGAATAGT GGAAATAGGA AGCTACTCAA CTCCGCTGCT GGATGAGAGC GAAAACCGGG TGGACAATAT AGATACGGCG TCAGATTATC TTAATAATGA GAAAGTACTG CCCGGAGAGG AATTTTCATT TAATGAAACC TTAGGCAAGA GAACAGCGGA AAAGGGATAT AAAAAAGCAC CGATAATAAA AAGAACGGAG AGCGGTTCCA TTAAAGGATA CGGAATAGGA GGGGGAATTT GCCAGCTTTC CACCACACTG TACAATGCAG CGGAAAAAGC CGGCCTGGAA ATAACGGAAA GGCATTCCCA TTCCAAGAAA GTGCCTTATG TACCCCAGGG CAAAGATGCG ATGGTATCCT ACGGTTCTTC CGACCTTAAG TTCAGAAATA ACCGTCAAAA TCCGATAGTT ATCAAATCGG AGATATCCGA CGGAAAAGTA ACGGTGCGGC TGTATGAAAT CAGGAAATAG
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Protein sequence | MGQKNGLKEI FAVATTIFIA VLSVSCSFGE RKVENNVYIK DINVGGKSKA EVEEIIKKMS DSIDVEPKDA ILNEDTLEIA PEEPGRKLNV ESTLKAVLNA KEGDRIEPVV EEVLPKITRE DVEKRIVEIG SYSTPLLDES ENRVDNIDTA SDYLNNEKVL PGEEFSFNET LGKRTAEKGY KKAPIIKRTE SGSIKGYGIG GGICQLSTTL YNAAEKAGLE ITERHSHSKK VPYVPQGKDA MVSYGSSDLK FRNNRQNPIV IKSEISDGKV TVRLYEIRK
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