Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2705 |
Symbol | |
ID | 4810699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3191490 |
End bp | 3192425 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640108124 |
Product | transketolase subunit B |
Protein accession | YP_001039097 |
Protein GI | 125975187 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3958] Transketolase, C-terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000194197 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGAAA AGATTGCGAC AAGGGAAGCT TACGGAAAAA CTTTGGCGGA GATAGGATCT GATCCGAGAA TAGTTGTCAT GGATGCGGAT TTGTCAAAGT CAACGAAAAC GGAATATTTC AAAAATAAAT ATCCCGAAAG GTTTTTCAAT ATGGGTATTG CAGAGGCGAA CATGATGGCA GCCGCGGCAG GAATTGCCTC CTGCGGTAAA GTAGTGTTTG CAAGCACTTT CGCGATGTTT GCTTCGGGAA GGGCTTTTGA ACAAATTAGA AATTCCATAT GCTATTCCAA TCTCGATGTA AAAATCGGTG CATCCCACTC CGGACTTACC GTGGGTGAAG ACGGAGCTTC CCACCAGACC ATTGAGGATA TAGCGATTAT GAGGGTTATA CCCAACATGA CTGTTGTCTG TCCTGCCGAT GCCGTTGAGG CAAGACATGC CACAATAGCG GCTTATAAGA CGCCGGGACC GTTCTATTTA AGGCTTACAA GGCTTGCGGT ACCGGTTATA TTCGACGAAA ATTACAAGTT TGAGCTTGGC AAGGGAGTTA CGATAAGAGA CGGCAACGAT GTTGCAATAA TTGCCACGGG CCTTATGGTG TCAAAAGCCA TTGAAGCGGC GGATATTTTA AAGCGTGAGG GAATTAATGC CAGACTTATC AACATTCATA CAATAAAGCC TATTGACAGG GATATAATTA TAAAGGCTGC AACTGAAACC GGTACGATTG TTACGTGTGA AGAACACAGT GTAATCGGAG GACTTGGAAG TGCCGTGGCG GAGGTGCTAG TGGAAACCTG TCCTGTTCCG ATGAGAATGG TTGGAGTTAT GGACAGGTTC GGAAAGTCCG GTAAACCGGA TGAACTTCTC AAAATGTATG GATTGACTGC TGAAAATATA GTGGAAAAAG TAAAAGAAGT CTTGAAAAAC AAATAG
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Protein sequence | MQEKIATREA YGKTLAEIGS DPRIVVMDAD LSKSTKTEYF KNKYPERFFN MGIAEANMMA AAAGIASCGK VVFASTFAMF ASGRAFEQIR NSICYSNLDV KIGASHSGLT VGEDGASHQT IEDIAIMRVI PNMTVVCPAD AVEARHATIA AYKTPGPFYL RLTRLAVPVI FDENYKFELG KGVTIRDGND VAIIATGLMV SKAIEAADIL KREGINARLI NIHTIKPIDR DIIIKAATET GTIVTCEEHS VIGGLGSAVA EVLVETCPVP MRMVGVMDRF GKSGKPDELL KMYGLTAENI VEKVKEVLKN K
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