| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2590 |
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| Symbol | |
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| ID | 4809012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3061974 |
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| End bp | 3063893 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640108004 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001038983 |
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| Protein GI | 125975073 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.549614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CAGCATCATT TATTCTTGTT CTTTCATTGC TGCTGGCTTT TATTATTCCG
GCTGAAGGGG GGTTGGCAGC AGAAGGCAAT TTACTTTTCA ACCCGGGCTT TGAACTGGGA
AGCACCGAAG GATGGTATCC TTACGGAGAG TGTACCATTG AGGCGGTCGG TACGGAAGCG
CACAGCGGAA ATTATAGCGT TTTTGTTACG GACAGGACTC AGGATTGGAA CGGTGTGGCC
CAGGACATGC TTGACAAGCT GACCGTAGGC ATGACCTATC AGGTTTCGGC ATGGGTCAAA
GTTGCAGGGA CAGGAAGTCA TCAAGTCAAA ATATCCATGA AGAAGGTCGA AACCGGCAAG
GAGCCGGTGT ATGACAACAT TGCGTCAATT ACCGTTGAGG GATCCGAATG GTACAGACTG
TCGGGTCCGT ACAGTTATAC CGGCACGAAT GTTACAAACC TTGAACTTTA CATAGAGGGA
CCCCAGCCGG GTGTCAGCTA CTATGTGGAT GATGTTACGG TAACTGAAGT GGGTTCCGCC
GCAACATGGA AGGAAGAGGC GAATGCAAGA ATTGAGCAAA TCAGAAAAAG GGATGCGAAA
ATAAGGATTG TGGATTCAAA CAATAAACCT GTTTCGGGAG TAAGCATTGA TGTTCGCCAG
GTAAAGCATG AATTTGGTTT TGGATCGGCT ATTACCATGA ATGGAATACA TGATCCCCGT
TATACCGAGT TCTTCAAAAA TAATTATGAG TGGGCGGTAT TTGAAAATGA AGCAAAATGG
TATTCCAACG AAAGCAGCCA GGGCAACGTT TCTTACGCCA ATGCGGACTA CTTGTACAAT
TGGTGTGCCG AAAACGGCAT AAAGGTAAGA GGCCATTGTA TATTCTGGGA GCCCGAAGAA
TGGCAGCCTT CATGGCTTAA AGGACTTACC GGAGATGCTC TTATGAAAGC GATAGATGCA
AGGCTTGAAA GTGTTGTTCC CCACTTTAGA GGCAAATTCC TTCACTGGGA TGTAAACAAT
GAGATGCTCC ATGGAGATTT CTTCAAAAGC CGCTTGGGAG AGTCCATATG GCCTTACATG
TTCAAAAGGG CCAGGGAGCT TGATCCGGAT GCAAAACTCT TTGTAAATGA TTATAACATT
ATCACTTATG TTGAGGGAGA TGCATACATA AGGCAGATTG AATGGCTCCT GCAAAACGGT
GCCGAGATAG ATGGCATAGG GGTGCAGGGA CATTTTGATG AAGATGTTGA ACCCCTTGTT
GTAAAAGCCA GACTGGACAA TTTGGCGACT TTGGGAATTC CCATATGGGT AACCGAATAT
GACTCTAAAA CGCCGGATGT AAACAAGAGA GCGGAGAATC TTGAAAACCT TTACCGTATC
GCATTCAGTC ATCCGGCGGT GGAAGGTATT ATAATGTGGG GATTCTGGGC AGGTAACCAC
TGGAGAGGTC AGGATGCCGC AATAGTAGAT CATGACTGGA CTGTAAATGA GGCAGGAAAG
AGATACCAGG CTTTGTTGAA AGAGTGGACC ACGATTACCT CAGGTACTAC CGACAGCACA
GGTGCATTTG ATTTCAGAGG TTTCCACGGC ACGTATGAAA TTACTGTGAG TGTTCCGGGG
AAAGAGCCTT TTGTAAAGAC CATTGAGCTT ACCAAAGGGA ACGGAACGGC TGTATATACA
TTTACTGTGG ACGGAACTGA TGCCGGAAAT GTTTTGTATG GGGATTTGAA CCAGGACGGC
CAGGTAAGTT CAACGGACTT GGTTGCCATG AAAAGATACC TGTTGAAAAA TTTTGAACTG
TCTGGCGTAG GGCTTGAGGC TGCAGATTTG AACAGCGATG GCAAAGTTAA TTCCACGGAT
TTGGTTGCTC TTAAAAGATT TTTGTTAAAA GAAATAGATG AATTGCCTTT AAAACGTTAA
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| Protein sequence | MKKTASFILV LSLLLAFIIP AEGGLAAEGN LLFNPGFELG STEGWYPYGE CTIEAVGTEA
HSGNYSVFVT DRTQDWNGVA QDMLDKLTVG MTYQVSAWVK VAGTGSHQVK ISMKKVETGK
EPVYDNIASI TVEGSEWYRL SGPYSYTGTN VTNLELYIEG PQPGVSYYVD DVTVTEVGSA
ATWKEEANAR IEQIRKRDAK IRIVDSNNKP VSGVSIDVRQ VKHEFGFGSA ITMNGIHDPR
YTEFFKNNYE WAVFENEAKW YSNESSQGNV SYANADYLYN WCAENGIKVR GHCIFWEPEE
WQPSWLKGLT GDALMKAIDA RLESVVPHFR GKFLHWDVNN EMLHGDFFKS RLGESIWPYM
FKRARELDPD AKLFVNDYNI ITYVEGDAYI RQIEWLLQNG AEIDGIGVQG HFDEDVEPLV
VKARLDNLAT LGIPIWVTEY DSKTPDVNKR AENLENLYRI AFSHPAVEGI IMWGFWAGNH
WRGQDAAIVD HDWTVNEAGK RYQALLKEWT TITSGTTDST GAFDFRGFHG TYEITVSVPG
KEPFVKTIEL TKGNGTAVYT FTVDGTDAGN VLYGDLNQDG QVSSTDLVAM KRYLLKNFEL
SGVGLEAADL NSDGKVNSTD LVALKRFLLK EIDELPLKR
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