| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2573 |
|---|
| Symbol | |
|---|
| ID | 4809180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3045692 |
|---|
| End bp | 3046459 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640107987 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_001038966 |
|---|
| Protein GI | 125975056 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATTATG TTGTGTCGGT ACGCAACCTG GGCATGAAAT ACCATTCTCT CAACGGAGAA
ATCGATGCCC TTCAGAATAT CAACTTTTCG GTCTCGGAGG GTGAGTTCAT AAGCATAGTG
GGACCAAGCG GCTGCGGTAA ATCGACACTG TTGTCGCTTA TTGCAGGACT CATGGCCCCA
ACCACGGGAG AGATATTGGT GGACGGCAAA CCTGTTTCGG AGACTTCCGA CAAGGTGGGA
TATATGCTGC AAAAAGACCA TCTTTTTGAA TGGAGGACCA TTTACCAGAA CGTGATTTTG
GGGCCGGAAA TAAGGAGAAC ACTGAACCAG GAAACAAAGG AATATGCTTT GAAACTTTTG
GCTACATATG GACTGTATGA ATTTAAAGAT AAATACCCTT CTCAGCTTTC GGGGGGAATG
AGGCAAAGAG CGGCTCTTAT AAGAACCCTC GTGGCAAAGC CCCAGATACT GCTCCTTGAT
GAAGCGTTTT CAGCGTTGGA TTACCAGACA AGACTGGCAG TGACGGAAGA CATATACTCA
ATCATTAAGA AAGAGAACAA GACTGCCATT CTTGTTACCC ATGACATAGC AGAAGGAATA
AGCATGGCCG ACAGGGTTAT TGTGCTGACA AAACGGCCGG CGACGATCAA GGCAATACAC
GATATCAAGC TAAGCTGCGA GAATCGGACA CCGCTTGCTT CCAGAGAAGC ACCGGAATTC
AGGGAGTATT TCAACAAGAT ATGGAAGGAG CTTGATATTT ATGTCTGA
|
|---|
| Protein sequence | MNYVVSVRNL GMKYHSLNGE IDALQNINFS VSEGEFISIV GPSGCGKSTL LSLIAGLMAP
TTGEILVDGK PVSETSDKVG YMLQKDHLFE WRTIYQNVIL GPEIRRTLNQ ETKEYALKLL
ATYGLYEFKD KYPSQLSGGM RQRAALIRTL VAKPQILLLD EAFSALDYQT RLAVTEDIYS
IIKKENKTAI LVTHDIAEGI SMADRVIVLT KRPATIKAIH DIKLSCENRT PLASREAPEF
REYFNKIWKE LDIYV
|
|---|
| |