Gene Cthe_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2540 
Symbol 
ID4809296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3009285 
End bp3009704 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content47% 
IMG OID640107956 
ProductMov34/MPN/PAD-1 
Protein accessionYP_001038935 
Protein GI125975025 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000146733 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGTCA TGACAAAGCA GCAGTACCAA GAGATACTTG AACATTCCCG CAATGCTTTG 
CCCAATGAAG CCTGCGGGCT TTTGGGCGGC AGGATAGAGA ATGGTGTGAA ATATGTTGAG
AAAGTGTATC TGTTGAGGAA CATAGACGAA AGCCCGGAAC ATTTCTCCAT GAACCCAAAG
GAGCAGTTTG CGGCAGTCAA AGATATGAGA AACAACGGTT GGGAGCTTCT GGGCAACTTT
CACAGCCATC CCGCAACGCC ATCCCGCCCC TCGGAAGAGG ACATAAGGCT TGCCTTTGAT
CCAAAGGCAA GTTATTTGAT ATTATCACTA AAGGACGACA CACCGGTGCT AAAGAGCTTT
AATATTTCAT CAGGACAGGC AACTCAGGAA GAGTTGTCTA TTGTGGGGGA GGAAGCATAG
 
Protein sequence
MIVMTKQQYQ EILEHSRNAL PNEACGLLGG RIENGVKYVE KVYLLRNIDE SPEHFSMNPK 
EQFAAVKDMR NNGWELLGNF HSHPATPSRP SEEDIRLAFD PKASYLILSL KDDTPVLKSF
NISSGQATQE ELSIVGEEA