| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2527 |
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| Symbol | hemC |
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| ID | 4809283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2995247 |
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| End bp | 2996125 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640107943 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001038922 |
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| Protein GI | 125975012 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.464027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATCA GAGTGGGCAG CCGTGAAAGC AAACTTGCTG TGAGGCAAGC GCAGATAGTG
ATAGATTCTA TAAAAAAATA CAACCCCGAT ATCGAGATCG AGCTTGTGAC AATGAAAACA
ACAGGGGATA AAATTCTTGA CAAAACCATT GACAAGATTG GCGGGAAAGG TCTGTTTGTA
AAGGAACTTG ATCGTGCCTT GCTGGACGGA AAGGTGGATA TCACCGTTCA CAGCTTTAAG
GACATGCCCA TGGATATAGA TGACCGTCTA CCCATTGTTG CGGTTTCAAA AAGGGAAGAC
CCCAGGGATG TGCTTGTATT GCCCAAAGGG AAAAATGAAA TTGATTTTAA CGGTCCCATC
GGCTGTTCAA GTTCAAGAAG AAAAATTCAG ATAGAGAAAA TCTATCCCGG CTGCACAGTC
GAGCCGATAA GGGGAAATGT TTTAACCCGC CTTGAAAAGC TGGACAAGGG AGAATATTCA
GCCATAGCCC TGGCATATGC CGGCCTTAAG AGACTGGGAC TTGAAGAGAG AATATGGCGT
GTGTTCAGTA CGGATGAAAT TGTTCCGGCG GCATGTCAGG GAATTATAGC TGTACAAGCA
CGAAAAGATT TTGACGCATC GATTTTGGCA AATTTCCATG ACAAAGACTC GTGGGATGTG
TCGGTGGCGG AGAGAAGCTT TATAAAGGCA TTGAACGGCG GATGCAGCTC TCCGTCCGCA
GCTTATGGAG TGATACAGGG CGAAAAAATA GTTCTCACGG GATTTTATGT TGATAAAAAC
GGCAAAATTT ATAAAATGAC CAAAACGGGA GACAGAAATC AGGGAGAAGC GTTGGGATAC
AGTTTGGCGA TGGAAATGCT GAAGGGAGCG GATGCATAA
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| Protein sequence | MKIRVGSRES KLAVRQAQIV IDSIKKYNPD IEIELVTMKT TGDKILDKTI DKIGGKGLFV
KELDRALLDG KVDITVHSFK DMPMDIDDRL PIVAVSKRED PRDVLVLPKG KNEIDFNGPI
GCSSSRRKIQ IEKIYPGCTV EPIRGNVLTR LEKLDKGEYS AIALAYAGLK RLGLEERIWR
VFSTDEIVPA ACQGIIAVQA RKDFDASILA NFHDKDSWDV SVAERSFIKA LNGGCSSPSA
AYGVIQGEKI VLTGFYVDKN GKIYKMTKTG DRNQGEALGY SLAMEMLKGA DA
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