Gene Cthe_2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2503 
Symbol 
ID4809442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp2969562 
End bp2970170 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content42% 
IMG OID640107919 
Productcupin 2, barrel 
Protein accessionYP_001038898 
Protein GI125974988 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.01258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTATAATA CGAACAACAA ATGGCCATAT CCTTGTTTTT CAAACGCGCC ATTATATACT 
TCACATAGTA TGCCACACGG TATGTACGGT GATAAAGTGT ACCAGTGCCC GTATTTTCTG 
AATATTCCAA TGTATAACTT CAGCCTTTGC AGCCCGTTTT TGCCTCAGTA TGGTCCTTGT 
ACGGAGAAGG CGAAGCCTTG CGATGTGATT AAATTGAAGG ACTATGGTCC AGAGCCTTTT 
GTAGTAAATA TTGAAGAAGC TGCAAAGCAA AACGACAATT TTCGCACGGC TTTGTGGACA 
GGAGAGCATT TGCAGCTTAC ATTAATGAGT ATAAATGTCG GGGAAGACAT AGGCCTCGAA 
ATGCATCCTG ACGTCGATCA ATTCATACGT ATAGAAGAAG GCCGCGGACT TGTTAAAATG 
GGCGACAGCA AAGATAATCT GGATTTTCAA AGAAATGTGC ATGAAGACTG TATAATTATC 
ATTCCTGCGG GGAAATGGCA TAATCTGATA AACACAGGTA ACAAACCGAT AAAATTGTAT 
TCCATTTATG CGCCGCCGAA CCATCCTCAC GGTACGGTTC ATGTTACTAA AAAGGATGCC 
GGTGAGTAA
 
Protein sequence
MYNTNNKWPY PCFSNAPLYT SHSMPHGMYG DKVYQCPYFL NIPMYNFSLC SPFLPQYGPC 
TEKAKPCDVI KLKDYGPEPF VVNIEEAAKQ NDNFRTALWT GEHLQLTLMS INVGEDIGLE 
MHPDVDQFIR IEEGRGLVKM GDSKDNLDFQ RNVHEDCIII IPAGKWHNLI NTGNKPIKLY 
SIYAPPNHPH GTVHVTKKDA GE