Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2433 |
Symbol | |
ID | 4808149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 2906514 |
End bp | 2907170 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640107847 |
Product | electron transport complex, RnfABCDGE type, E subunit |
Protein accession | YP_001038828 |
Protein GI | 125974918 |
COG category | [C] Energy production and conversion |
COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000109684 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGGTT TTAAGACTGT AACGAAAGGG ATAATAAAGG AAAATCCGGT ATTCAGGCTT GTCCTTGGTA CATGCCCCAC TTTGGCTGTG ACAACATCAG CCGAAAATGC CTTGGGAATG GGGGCGGCCG TTATATTTGT GTTGATGGGG TCAAATGTAG TGATTTCCCT TTTGAGAAAG GTGATACCTG ACAAGGTCAG AATTCCTGCA TATATAACAA TTATTTCGGG ATTTGTGACG ATAGTTCAGA TGCTGATTAA GGCATATCTT CCTGCTATTG ATAAGCAGCT GGGTATATTT ATACCTCTTA TAGTTGTAAA CTGTATCATA CTTGCAAGAG CGGAGATGTT TGCAAGCAAG AACGGTCCAC TCATGTCAAT TCTTGACGGG CTTGGCATGG GAATAGGTTT TACCTTGTCG CTTCTTGTTA TGGGAAGCGT CAGAGAGATA CTTGGAAACG GCACATGGTT TGGAATGAAT ATTACCGGTG GAATTTATGA ACCGGCAATA ATTATGATAC TTCCTCCCGG TGGATTTTTG GCATTTGGAT TTATAATGGC AGCTATAAAC AAGCTTTCTT CCAAAAAAGT TGAGCATACA GGCTGCGCAT CATGTCCTAT GCCTTGCGGG GTTTCAAATA ATGGTGAGGA GGCTTAA
|
Protein sequence | MSGFKTVTKG IIKENPVFRL VLGTCPTLAV TTSAENALGM GAAVIFVLMG SNVVISLLRK VIPDKVRIPA YITIISGFVT IVQMLIKAYL PAIDKQLGIF IPLIVVNCII LARAEMFASK NGPLMSILDG LGMGIGFTLS LLVMGSVREI LGNGTWFGMN ITGGIYEPAI IMILPPGGFL AFGFIMAAIN KLSSKKVEHT GCASCPMPCG VSNNGEEA
|
| |