Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2415 |
Symbol | |
ID | 4808130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 2884231 |
End bp | 2884932 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640107828 |
Product | cell wall hydrolase, SleB |
Protein accession | YP_001038810 |
Protein GI | 125974900 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
TIGRFAM ID | [TIGR02869] spore cortex-lytic enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.528951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTTTGA AGACATTTTG GAGAATACTT ATTCTTGCCG TTATATTTTT CATTGGCATA CCGCTGTTTT TAAATGGCAG GTTCTTTATT GTACCAATTA CCGAAAGACT TGCTCCCAAC ATGCAGAACG AGGATGTAGT GAGACTGCAG CAAAGGCTTA AGAACTGGGA ATATTATGAC GGCAAAATAA CCGGAGTGTA TGATTTTAAA ACATATTTGG CAGTAAGGGA TTTTCAGAAA ACATATAATT TGCCCGTAAC CGGTATTGCA GGGGAAGAAA CTTTGGCTGC GATGGGACTT ACCACTCTTT CCCGGTGGAG TGAGGTCCGG GCACAATCAA GCCGGATAAG TGATGAACAG CTTTTGGCAA GGGCGATTAA CGGGGAAGCC AGAGGAGAAC CCTACGAGGG ACAGGTGGCT GTAGGTGCGG TTATTTTGAA CAGGACAAGG GACCCCAGAT TTCCCAAAAC CATTGCAGGG GTTATATACC AGCCGGGAGC GTTTACGGCA GTTTCGGACG GTCAGATAAA TGTACCTATT GACCCCAATT CAACTGTTGT GAAAGCTGCA AGAGACGCTT TGAACGGTTG GGATCCCACC AATGGATGCA TATACTATTG GAATCCGGCA ACTGCAACCA GCAAATGGAT ATGGAGCAGA AAGATAGTTA CAAAAATCGG AAAGCATTAT TTTGGAATAT GA
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Protein sequence | MFLKTFWRIL ILAVIFFIGI PLFLNGRFFI VPITERLAPN MQNEDVVRLQ QRLKNWEYYD GKITGVYDFK TYLAVRDFQK TYNLPVTGIA GEETLAAMGL TTLSRWSEVR AQSSRISDEQ LLARAINGEA RGEPYEGQVA VGAVILNRTR DPRFPKTIAG VIYQPGAFTA VSDGQINVPI DPNSTVVKAA RDALNGWDPT NGCIYYWNPA TATSKWIWSR KIVTKIGKHY FGI
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