Gene Cthe_2315 details

Gene Information

• Locus tag: Cthe_2315
• ID: 4809243
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 2760694
• End bp: 2761128
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640107722
• Product: T/G mismatch-specific endonuclease
• Protein accession: YP_001038710
• Protein GI: 125974800
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3727] DNA G:T-mismatch repair endonuclease
• TIGRFAM ID: [TIGR00632] DNA mismatch endonuclease Vsr

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATTT TTACACCTGA AAAAAGAAGA GAAGTTATGC AAGCCATAAG GGGAAAAGAT 
ACAACCATAG AAATGATGCT TCGAAAAAAA CTTTGGGAAA AAGGATATAG ATATAGAAAA 
AACTACAATA AAATCGTTGG AAAGCCCGAC ATTGTATTTC CGAAATACAA AATTGCCATT 
TTTTGTGATT CCACCTTCTG GCATGGCTAC AACTGGGAAG AGAAAAAGAA ACGAATTGGC 
ACAAACAGGG AATACTGGAT AAGAAAAATA GAGGGCAACA TTGAGAGGGA TAAAAGAATT 
AATCAAGAAT TAATTGCAGG CGGCTGGATA GTTCTAAGAT TTTGGGAAAC AGATATAAAA 
AAGAATCTTG ATGATTGTAT AGCAAAAATA GAAGAAGCCA TTCAACAAAG AAAATCACAA 
ATTAATGATG GGTAA 

 

Protein sequence

MDIFTPEKRR EVMQAIRGKD TTIEMMLRKK LWEKGYRYRK NYNKIVGKPD IVFPKYKIAI 
FCDSTFWHGY NWEEKKKRIG TNREYWIRKI EGNIERDKRI NQELIAGGWI VLRFWETDIK 
KNLDDCIAKI EEAIQQRKSQ INDG