| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2306 |
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| Symbol | |
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| ID | 4809233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2751534 |
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| End bp | 2752943 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640107712 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001038701 |
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| Protein GI | 125974791 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.30452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGCAAT TTTTGCGTAA ACGGAAATGG TCTCAAAAAT ATTCAAAACA AATGATATGG
GAAGTGATAT CTCTCTCGTG GCCGGCGTTT ATAGAACTGG TTATGTCAAC CCTATTTAGC
ATGATTGACA TGATTATGGT GGGGCGGCTC AACTCAGCAG CAATAACTGC GGTTGGACTT
ACCACCCAGC CTTTTATGGT TTTACTGGCG ATATTTTCGG CTGTCAATGT GGGTACAACC
ACGATTGTGG CATGGAATAT TGGCGCCGGC AACACTAAAA AAGCTAATGA GGTTGCACGG
CAGTCCATTA TTCTGAACTT TATCATGGGA ATTATCATAA GCACGATAGG AGTTTTTATG
GCTCATGACA TTGTAGTCTT TATGGGAGCC GAAGCGGATA CTGTGAAGGA TGCCACCGTA
TACTTTCAAA TAGTATCTGC CGGACTGGTT TTCCAGGCAG TTAACATGGG GGTTACGGCT
GCTCTGAGGG GAGCGGGGGA AACAACGATT CCCATGATAT ACAATGTAGG TAGTAATCTT
TTCAATGTAC TGGGAAACTA TTTGCTTATA TTCGGAAAGC TCGGTTTGCC CAAACTTGGC
GTGGCAGGAG CTGCAATTTC CACGTCCGTA TCGAGATTTT TAGCGTGTGT GGTTGGTTTG
TGTGTAGTAT TTTTCTTAAA ATGGTCTGCT ATCTCAATTA GGCTTAAGGG CAGCTACCGG
ATAAATTTTG ATATTGCCAG AGAAATTTTT TCAATAGGTT TGCCGTCGGC AATGGAACAA
TTTGTGGTTC AGGGCGGACT TATGATGTTT GCCCGTACGG TTTCAAGCCT GGGTACCGTA
ACATTTGCCG CTCATCAGAT AGGGCTCAGT ATTTGCGGAC TTACTTTTTC ACCCAGCATG
GCTTTTGGTG TTGCCGGCAC AACTCTGGTG GGACAAAGTC TTGGAGCAAA TGACGAGGAA
CGGGCTAAAA GGTATGCCGA TATCATACAT CATATGGCTA TTGCAGTTGC CTGCTTTATG
GGATTGATGT TTATCTTGTT CTCATATCCC CTGGCCTGTC TGTATACAGA AGACCTTAAA
GTTGCCGCAA TGGCCAGTAT TGTGCTTAAA ATAATGGCTT TGGCCCAGCC CGGACAATCG
ACGCAGCTTT CCCTTGCCGG TGTGCTCAGG GGAGCGGGAG ATACTATGTT TCCACTATAT
TCATCTATTG CCGGCATTTG GGGTTTTCGT GTGGTAGTTG CTTATATTTT TGTAAGTGTT
TTCCGCTGGG GGCTTATAGG AGCATGGGTT GCTCTCGTGC TGGACCAATA TACAAGGGCT
GCTATTGTGT ATTTTAGGTA TGCTTCGGGA AAATGGAAGT ATGTTAAGGC AAGAAACCAA
GAGGTTGAGA AGATGAGAGC ATGTTCATGA
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| Protein sequence | MLQFLRKRKW SQKYSKQMIW EVISLSWPAF IELVMSTLFS MIDMIMVGRL NSAAITAVGL
TTQPFMVLLA IFSAVNVGTT TIVAWNIGAG NTKKANEVAR QSIILNFIMG IIISTIGVFM
AHDIVVFMGA EADTVKDATV YFQIVSAGLV FQAVNMGVTA ALRGAGETTI PMIYNVGSNL
FNVLGNYLLI FGKLGLPKLG VAGAAISTSV SRFLACVVGL CVVFFLKWSA ISIRLKGSYR
INFDIAREIF SIGLPSAMEQ FVVQGGLMMF ARTVSSLGTV TFAAHQIGLS ICGLTFSPSM
AFGVAGTTLV GQSLGANDEE RAKRYADIIH HMAIAVACFM GLMFILFSYP LACLYTEDLK
VAAMASIVLK IMALAQPGQS TQLSLAGVLR GAGDTMFPLY SSIAGIWGFR VVVAYIFVSV
FRWGLIGAWV ALVLDQYTRA AIVYFRYASG KWKYVKARNQ EVEKMRACS
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