Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2306 |
Symbol | |
ID | 4809233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2751534 |
End bp | 2752943 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640107712 |
Product | MATE efflux family protein |
Protein accession | YP_001038701 |
Protein GI | 125974791 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.30452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTGCAAT TTTTGCGTAA ACGGAAATGG TCTCAAAAAT ATTCAAAACA AATGATATGG GAAGTGATAT CTCTCTCGTG GCCGGCGTTT ATAGAACTGG TTATGTCAAC CCTATTTAGC ATGATTGACA TGATTATGGT GGGGCGGCTC AACTCAGCAG CAATAACTGC GGTTGGACTT ACCACCCAGC CTTTTATGGT TTTACTGGCG ATATTTTCGG CTGTCAATGT GGGTACAACC ACGATTGTGG CATGGAATAT TGGCGCCGGC AACACTAAAA AAGCTAATGA GGTTGCACGG CAGTCCATTA TTCTGAACTT TATCATGGGA ATTATCATAA GCACGATAGG AGTTTTTATG GCTCATGACA TTGTAGTCTT TATGGGAGCC GAAGCGGATA CTGTGAAGGA TGCCACCGTA TACTTTCAAA TAGTATCTGC CGGACTGGTT TTCCAGGCAG TTAACATGGG GGTTACGGCT GCTCTGAGGG GAGCGGGGGA AACAACGATT CCCATGATAT ACAATGTAGG TAGTAATCTT TTCAATGTAC TGGGAAACTA TTTGCTTATA TTCGGAAAGC TCGGTTTGCC CAAACTTGGC GTGGCAGGAG CTGCAATTTC CACGTCCGTA TCGAGATTTT TAGCGTGTGT GGTTGGTTTG TGTGTAGTAT TTTTCTTAAA ATGGTCTGCT ATCTCAATTA GGCTTAAGGG CAGCTACCGG ATAAATTTTG ATATTGCCAG AGAAATTTTT TCAATAGGTT TGCCGTCGGC AATGGAACAA TTTGTGGTTC AGGGCGGACT TATGATGTTT GCCCGTACGG TTTCAAGCCT GGGTACCGTA ACATTTGCCG CTCATCAGAT AGGGCTCAGT ATTTGCGGAC TTACTTTTTC ACCCAGCATG GCTTTTGGTG TTGCCGGCAC AACTCTGGTG GGACAAAGTC TTGGAGCAAA TGACGAGGAA CGGGCTAAAA GGTATGCCGA TATCATACAT CATATGGCTA TTGCAGTTGC CTGCTTTATG GGATTGATGT TTATCTTGTT CTCATATCCC CTGGCCTGTC TGTATACAGA AGACCTTAAA GTTGCCGCAA TGGCCAGTAT TGTGCTTAAA ATAATGGCTT TGGCCCAGCC CGGACAATCG ACGCAGCTTT CCCTTGCCGG TGTGCTCAGG GGAGCGGGAG ATACTATGTT TCCACTATAT TCATCTATTG CCGGCATTTG GGGTTTTCGT GTGGTAGTTG CTTATATTTT TGTAAGTGTT TTCCGCTGGG GGCTTATAGG AGCATGGGTT GCTCTCGTGC TGGACCAATA TACAAGGGCT GCTATTGTGT ATTTTAGGTA TGCTTCGGGA AAATGGAAGT ATGTTAAGGC AAGAAACCAA GAGGTTGAGA AGATGAGAGC ATGTTCATGA
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Protein sequence | MLQFLRKRKW SQKYSKQMIW EVISLSWPAF IELVMSTLFS MIDMIMVGRL NSAAITAVGL TTQPFMVLLA IFSAVNVGTT TIVAWNIGAG NTKKANEVAR QSIILNFIMG IIISTIGVFM AHDIVVFMGA EADTVKDATV YFQIVSAGLV FQAVNMGVTA ALRGAGETTI PMIYNVGSNL FNVLGNYLLI FGKLGLPKLG VAGAAISTSV SRFLACVVGL CVVFFLKWSA ISIRLKGSYR INFDIAREIF SIGLPSAMEQ FVVQGGLMMF ARTVSSLGTV TFAAHQIGLS ICGLTFSPSM AFGVAGTTLV GQSLGANDEE RAKRYADIIH HMAIAVACFM GLMFILFSYP LACLYTEDLK VAAMASIVLK IMALAQPGQS TQLSLAGVLR GAGDTMFPLY SSIAGIWGFR VVVAYIFVSV FRWGLIGAWV ALVLDQYTRA AIVYFRYASG KWKYVKARNQ EVEKMRACS
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