| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2299 |
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| Symbol | |
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| ID | 4809888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2743056 |
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| End bp | 2745308 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640107705 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_001038694 |
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| Protein GI | 125974784 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTTG CAAAGCCTGT TGACAATTAT GAAGGAACAT ACGAGTATCA TGTAAAAAGG
TGCGCTGAAA TACTGGAGTT TGAAATTAGG TCAAAGTATC CGGCCTTTAA ACGAATTCTC
TCGAGTTACG GATTTGATGT TGAGGATTTT ATTGAAAAAA TGAAAACAGC CGTAGTTTTT
CATGATTTTG GGAAGCTTAA TCCGTATTTT CAAGAATATA TGAAAAGAAA AATCGAGAAA
AAAAAGCTTT CAGGTATAAA GCATTTTAGG CACGAAGTTC TTTCGTGCCT TTTTCTTATG
TCAAATGAGA AGAGTAAAGA AGCCTACTTC CCATATCATA TATTGGCGGT GCTTGGACAT
CACAAAATGC TTTCTTCGGA TTTGAAAAGT TTTGAAAGAG AGAGGGTTTG GCAGGACAGG
TGGCCTGAGA TTTCAGAAGA TGCCGTAAAA CATGCGATGG AAATTGCTTC TGAGTTTGGG
ATAAAAGTTG ACGGAAGAAG CGGACCGCAA GGGAAGAGTG CCAACAATTA TCTGAATGCT
TTGTTAAAGT TGGCTTTGAT GTTGTATGAG AAAGACAGGG AAAAACTAAA AGTGGTTTAT
TCTGTATCAA AGGGGCTTTT GCATAACTGT GACTGGATAG CTTCTTCAAA TCTTGACTAC
AATAGGGTAT GCCTTATTGG TGTATCTGCC AATGATATTG AAAAGAAGCT TAAGGAAAAG
TTGGAGAAAG AGAACAAAAA ATATGTAAGA AGAGAGTTTC ACTCAATATG TGCCAATGCA
GTCGGGGATG TGGTGGCGAT TGCACCCACG GGGTCCGGAA AGACTGAGGC GGCATTGATG
TGGGCTTTGA ATTCCGAAAC AACCAAAATT ATTTTTCTCA TGCCGACAAT GGTTACTTCC
AACAGCCTTT ATGAGAGACT TTCAACCCAT TATTTCCCCA AAGAGAGCTG TGGGCTGTCC
CATTCAGGGG CGGAAACGTA TTTTTATAAA AAGTCTAAAG AAGATGATAC GGAAAATGAT
TATGACTGGT CTCAGATTCT ACATCAGAAG GCTTTTATTC CGGCGGTTAT GGTTTCGACA
GTGGACCAGG TTTTGTCCAC GGAATTTCAT ACAGGATTAT GGAATCAGAA GGAATATGCA
CTGGTCGGAA GTTCGGTGAT TTTTGACGAA ATACATGCTT ATGATGGCTA TACCATAGGC
CTTATAACCG GGGTTATAAA AAAGATAAAA AAGTATGGCG GCAGGGTCAT GCTGATGAGT
GCGACCATGC CGAAGTTTTT AAGAAATCAT TTTTTAGACC TTCTCGATTC AAAATGTTTG
GTTGTTGCAG AGGAGCTTAT GGAAAGGGCA AGCAATGAAT GGGCATACTT GGATACCGAT
CTTGAGGGTA TAAGGGAAAA GGTACTGAAG GAAGTATCAG AGGGGAAGAA GGTAGCACTT
ATTGTAAATG ATGTGGAAAC GGCCAAAAAG GAGTATAAAT ACTACTCTAA AAAAGGATTT
GATGTATTAT GTCTTCATTC TGAATTTACA ATGAAAGACC GGCAGGAAAA AGAGGGCCGG
TTGACATCGA AAGAGGGTAA TCCTTACCGG CTTGTGATAT CCACCCAAGT TATAGAGGTG
TCTCTGGATG TAAGTTTTGA TGTTATGTTC TCGGAGTGCG CGCCTATAGA CAGCCTGGTG
CAGAGGGCGG GAAGGTGTAA TCGCCACGGA CTCATAAACT TTGGAAGGTT TTATGTTTTT
AATCCTTCGG ATACTGCTGT AAAATACGTC TATCGAAAAC AGAAGGATAT TCTTGACAAA
ACTGTTGAGG TAATAAGGAA AAATTCAGGC AGATTAACTG AGAAGCAAAT TATGGCTATG
GTTGAGGAAG TTTACGAGGG ATTTAATCTG TATGATGAAG ATTATAAACT GGGAATTGAC
ATTGTACGGG ACATTGAACA GAGATACAAC TTTTTTGATG TAAATATTTT CCAAGAAGAC
GAGAATCTTT CCACACGAAA ATTTGATGTT GTTAAAGTTC CAGTTATTCC TGCGGATGAG
TATATGGAGA TTGTCGAAAA GCTGTTTGAA AGCAAGGATT ATAAAATGAT ATCTCTTTAT
GAAATACCTG TTTCAATAAG CAAGTTTAAA AAGTATATAA GAAGGCTGGA AATAAGCAAT
AAATACAATT TGCCTATATT TAAAATAAAG TATAGCAGTG AGTATGGCAT TGATTATGAG
GAGGATGATT CGAATACCTG TTATTTATAT TAG
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| Protein sequence | MYFAKPVDNY EGTYEYHVKR CAEILEFEIR SKYPAFKRIL SSYGFDVEDF IEKMKTAVVF
HDFGKLNPYF QEYMKRKIEK KKLSGIKHFR HEVLSCLFLM SNEKSKEAYF PYHILAVLGH
HKMLSSDLKS FERERVWQDR WPEISEDAVK HAMEIASEFG IKVDGRSGPQ GKSANNYLNA
LLKLALMLYE KDREKLKVVY SVSKGLLHNC DWIASSNLDY NRVCLIGVSA NDIEKKLKEK
LEKENKKYVR REFHSICANA VGDVVAIAPT GSGKTEAALM WALNSETTKI IFLMPTMVTS
NSLYERLSTH YFPKESCGLS HSGAETYFYK KSKEDDTEND YDWSQILHQK AFIPAVMVST
VDQVLSTEFH TGLWNQKEYA LVGSSVIFDE IHAYDGYTIG LITGVIKKIK KYGGRVMLMS
ATMPKFLRNH FLDLLDSKCL VVAEELMERA SNEWAYLDTD LEGIREKVLK EVSEGKKVAL
IVNDVETAKK EYKYYSKKGF DVLCLHSEFT MKDRQEKEGR LTSKEGNPYR LVISTQVIEV
SLDVSFDVMF SECAPIDSLV QRAGRCNRHG LINFGRFYVF NPSDTAVKYV YRKQKDILDK
TVEVIRKNSG RLTEKQIMAM VEEVYEGFNL YDEDYKLGID IVRDIEQRYN FFDVNIFQED
ENLSTRKFDV VKVPVIPADE YMEIVEKLFE SKDYKMISLY EIPVSISKFK KYIRRLEISN
KYNLPIFKIK YSSEYGIDYE EDDSNTCYLY
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