| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2276 |
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| Symbol | |
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| ID | 4809865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2706755 |
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| End bp | 2707933 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640107682 |
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| Product | AAA ATPase, central region |
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| Protein accession | YP_001038671 |
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| Protein GI | 125974761 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00996257 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA AAAGAAACGT ATTGATTATT TCCATCGCTA TAATTGCAGT CATCGTCGGC
ATAACTCTTT ATTTTGAAAG AGACAACTCT CAATATATGC CTTACCCTGA TTTTTACAAT
TACGTGAAGT CAGGCAAGGT GGTTTCCGCA AAAATAGGAA ATGATGAAGT AAGGTTTTAT
TTAAACGGTG ACCAGACAGA ATACCGCACC GACAATCCGG AACTGGATTC CTTCAAAGAA
TTTTTACTCC TTAACGGAGT TAAAGTTACT TCGGAAAAAA GTGCCGATGA ACTTTTCGTC
ACGGTTACTG ATGCAATTTT CAGCATTATT TTTTTCGGGA TTATAATATT CGGCTTGTAT
AAATTTATTG ATTTCAGAAG AAGCACATTT AAAGTTATTC GCAACAACGA CACAAAATTT
TCAGATGTTG CCGGCATGGA AGATTTAAAA AGAGAAATGC TTCAGGCCGT GGACATCTTA
AAACATCCCA AAGAGTATGC GGCAAAAGGA ATACGCCCGA TAAACGGTAT TCTGCTTGAA
GGCAATCCCG GAAACGGGAA AACATTGTTT GCAAGGGCAT TGGCAGGAGA AGCCAAAGTC
AATTTCATTG CCACCAAGGC CACGGATTTT CAAAGTGCAA TCATGTCCAT AGGACCTGCC
AAAATTAAGG CCCTGTTTAG AAAAGCCCGT GCCAACAAGC CCTGCATCAT ATTCATAGAC
GAGTTTGATG GAATAGGTGA AAAACGCAAT TATGCCGGAA CCGGAATTGA CAAAGAAAAC
AACAGAATTA TTGCCGCAAT GCTAAATGAA ATGGATGGTT TTACCCGTGA AGGCGGTGTT
ATGGTTATTG CCGCAACCAA CAATTACAAG GCCCTTGATG AAGCATTGGT GCGTCCGGGA
AGGTTTGACA AAAAATACAC CGTTCCTAAC CCGGATTATA AAACCAGAAT TGAATTGATA
AAAATATATA CAAAAAACAA AAAATTGTCC GAAAGCATAT CAATTGAACA ACTGGCCGCA
AAATTTGAAG GCATGACCTG TTCCCAGATA GAAACAATAC TTAATGAAGC CGCAGTAATT
GCCACCGGCG AAGGTCACAG TGATATAACG GAAAGCGACC TTATCGAGGC AGTAAAAAAG
ATATGTCATC TTACAACAGT AGGAGTAAAA AGAAAATAA
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| Protein sequence | MKNKRNVLII SIAIIAVIVG ITLYFERDNS QYMPYPDFYN YVKSGKVVSA KIGNDEVRFY
LNGDQTEYRT DNPELDSFKE FLLLNGVKVT SEKSADELFV TVTDAIFSII FFGIIIFGLY
KFIDFRRSTF KVIRNNDTKF SDVAGMEDLK REMLQAVDIL KHPKEYAAKG IRPINGILLE
GNPGNGKTLF ARALAGEAKV NFIATKATDF QSAIMSIGPA KIKALFRKAR ANKPCIIFID
EFDGIGEKRN YAGTGIDKEN NRIIAAMLNE MDGFTREGGV MVIAATNNYK ALDEALVRPG
RFDKKYTVPN PDYKTRIELI KIYTKNKKLS ESISIEQLAA KFEGMTCSQI ETILNEAAVI
ATGEGHSDIT ESDLIEAVKK ICHLTTVGVK RK
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