Gene Cthe_2262 details

Gene Information

• Locus tag: Cthe_2262
• ID: 4810000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 2690497
• End bp: 2692452
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640107668
• Product: V-type ATPase, 116 kDa subunit
• Protein accession: YP_001038657
• Protein GI: 125974747
• COG category: [C] Energy production and conversion
• COG ID: [COG1269] Archaeal/vacuolar-type H+-ATPase subunit I

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.181857
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATAG TTAAAATGAA TAAAATCTCA CTTATAGGGC TTGAATCTGA AAAGGAACGC 
ATCCTCGAAA ATCTCATGAA ATTAGGTGTC GTTGAGATTA CGGATGCAAA AGAAAAAATA 
TCTTCCGATG AATGGAAAGA GCTGGTAAAT ATTGACGGAG ACAGTGAAAG CGTCTCAAGG 
CTTGATGCTC AGATTGACAG AGTATCGGCC GTTATTGACT ATCTGGACAA ATTTGACAAG 
CGCAAAAAAC CTCTCTTTTC AGCGAGACGG GATATCAGCA CAAGCGAGTT GAACATGGTT 
TTGCAAAACC AGGATAAGCT TTGGTCCGTT ATTGATGAAG TCAACCGGTA TGATGAAATG 
CTCGCAAACT TAAAGGCGGA AAAAAACAGG AACTCAAATA TGATTTTGAG TCTCAAACCG 
TGGGAAGCTT TGGACATTCC CTTAGAACTT ACGGCAACTG CATCTTCCAC GGTTTTGATC 
GGGGTTGTGC CGGAAATGGC AAATACCGAT AAAATAAAAC AGGATCTCGA TGAAAAAGTC 
CCGGAAAGCC ATTTTGAAGT TCTTAGCAGA GACAAGGAGC AAAGTTATCT TCTTATCATA 
TATTTAACTT CCAAAGAAGA AGACGTTATG AATGTATTAA AGCAGTACGG CTTTTCCAAG 
GTAACTTTCA AAGAGCTTTC AGGAACTGTA AAACACAATA TCGATCAAGC TTTGGAAAAC 
ATAGAAAGAA TAGAAGAGGA AATCGAGTAT ATCGAAGAAA ATATGACATC TTATGTGAAA 
TACAAGGACG ATTTGGAAGT TCTTCACGAT TACCTGTCCA TTGAAAGAGA GCGAAAAATC 
GTACTCTCAA ATCTGCTCAA AACCAACAAG GTGTTCATGC TGGAAGGATG GCTCCCCGAA 
AACTCGGCGG AAGAAGTTAA AACCTTCCTT GAAAAAAGCA GTGATTGCTA CATAGAAATC 
GTCAAGCCGA AAGAAGACGA GGAATTCCCT GTGCTGCTTG CCAACAGGGC CATCCCAAGT 
ACTGTGGAAT CAATAACCAA CATGTACAGT GTGCCAAACT GTAAAGAAAT TGACCCGAAC 
GCAATAATGG CTCCATTTTT TATATTGTTT TTCGGACTTA TGCTAAGCGA CGGTGGTTAT 
GGTGCCATAA TGACCATACT GGCAACTATA ATCCTTAAGG TGTTCAAGCT TGAAGAAAGT 
ACGAAAAAGT TTATGAAACT CATGGTTTAC TGTGGTATTT CCACAATGTT CTGGGGCTTG 
CTTTTCGGAG GCTGGTTCGG TATTCCGAAC ATACCGGCAG TGTGGTTCAA TCCTACAGAA 
GATCCGGAAC TGTTGCTTAG TTTCTCGTTG CTCTTTGGGG CCATCCACAT ATATGTCGGT 
CTTGGAGTTC GGGCTGCAAA CCTTATCAAG GATAAAAAAT ACCTTGATGC GGTTTTTGAT 
TCGCTGTTCT GGTATATATT GTTTACCGGA TTCATACTGT TTGTACTTCC CTATATCCCA 
AAGATTGACG CCGAAAGTGT AACCGGTCTG GTAAACTTAG GCAAGTATCT TATGATTATC 
GGTGCAGTTC TTTTGATTCT TACCCAGGGC AGAGGAAACA AAAATATTAT CGCAAAGCTT 
TTTGGCGGTG TTGCAAGCCT TTATGACCTT ATAAGCTTCA TGAGTGACGT TTTGTCCTAC 
TCAAGACTTC TTGCACTTGG TCTTGCAACT TCGGTTATTG CGTCCATTAT TAACCAGATG 
GCAACAATGT TTGGTTTCAA CAACATATTA AAAATAATTG CCGTAGTCGC CATTCTGGCT 
TTTGGACACC TGTTCAATTT TGCAATCAAT GCGCTGGGAG CATATGTTCA CTCTTGCAGG 
CTGCAGTACA TTGAGTTTTT CGGAAAGTTT TACAAGGGCG GAGGCACAGC CTTTGAACCC 
TTTAAAGCAA AAACAAAATA TATAAATCTA AAATAA 

 

Protein sequence

MAIVKMNKIS LIGLESEKER ILENLMKLGV VEITDAKEKI SSDEWKELVN IDGDSESVSR 
LDAQIDRVSA VIDYLDKFDK RKKPLFSARR DISTSELNMV LQNQDKLWSV IDEVNRYDEM 
LANLKAEKNR NSNMILSLKP WEALDIPLEL TATASSTVLI GVVPEMANTD KIKQDLDEKV 
PESHFEVLSR DKEQSYLLII YLTSKEEDVM NVLKQYGFSK VTFKELSGTV KHNIDQALEN 
IERIEEEIEY IEENMTSYVK YKDDLEVLHD YLSIERERKI VLSNLLKTNK VFMLEGWLPE 
NSAEEVKTFL EKSSDCYIEI VKPKEDEEFP VLLANRAIPS TVESITNMYS VPNCKEIDPN 
AIMAPFFILF FGLMLSDGGY GAIMTILATI ILKVFKLEES TKKFMKLMVY CGISTMFWGL 
LFGGWFGIPN IPAVWFNPTE DPELLLSFSL LFGAIHIYVG LGVRAANLIK DKKYLDAVFD 
SLFWYILFTG FILFVLPYIP KIDAESVTGL VNLGKYLMII GAVLLILTQG RGNKNIIAKL 
FGGVASLYDL ISFMSDVLSY SRLLALGLAT SVIASIINQM ATMFGFNNIL KIIAVVAILA 
FGHLFNFAIN ALGAYVHSCR LQYIEFFGKF YKGGGTAFEP FKAKTKYINL K