Gene Cthe_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2254 
Symbol 
ID4809992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2682435 
End bp2682989 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content39% 
IMG OID640107660 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_001038649 
Protein GI125974739 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000437646 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATC AAATTAAAGA AATTTTGGTT ACCAGAGAGG AACTTAAAAA CAACGCTAAA 
GAGTTGGGAA AGAGGATTTC CAGTGACTAT GAAGGAAAAG AGCTTGTCCT GATAGGGGTG
TTAAAAGGAG GAGTGGTATT TTTTGCCGAC TTAATAAGGG AAATAACCAT ACCCATTGAT
GTGGATTTCA TATCGGTGTC AAGTTACGGC AATTCCACCA AATCATCGGG GGTTGTGCGT
ATAATAAAAG ACATCGATAT AGATATAACC AACAAGCATG TCCTTATCGT TGAAGACTTG
GTGGATACAG GTCTTACGCT GCATTATCTG AAAAGCATGT TTGAAGCCAG AGGACCCAAA
GATGTAAAAA TATGCACCGC CCTTGACAAA CCGTCAAGGA GAAAGGTTGA TTTGGAAATA
GATTATAAAG GTATCACAAT ACCGGATAAG TTTGTGGTGG GCTATGGATT GGATTATGCG
GAAAAATACA GAAATCTCCC GGATGTGTGC GTGCTGGATT CGTCTGTTTA TACGGACAAA
GAAGATATGG ACTAA
 
Protein sequence
MINQIKEILV TREELKNNAK ELGKRISSDY EGKELVLIGV LKGGVVFFAD LIREITIPID 
VDFISVSSYG NSTKSSGVVR IIKDIDIDIT NKHVLIVEDL VDTGLTLHYL KSMFEARGPK
DVKICTALDK PSRRKVDLEI DYKGITIPDK FVVGYGLDYA EKYRNLPDVC VLDSSVYTDK
EDMD