Gene Cthe_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2224 
Symbol 
ID4811089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2653172 
End bp2653864 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content38% 
IMG OID640107630 
Productputative methionyl-tRNA formyltransferase 
Protein accessionYP_001038619 
Protein GI125974709 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAA TTATTGCCAC CACAAAGTCA TGGAACATAA AAAATGCGCA AAAGTTTAAA 
AAAGAAAACG AGTCAAAGTA CAATACAACT ATAATTACGA ATAAGGATGA ACTTACTTTT
GAAAAAGTAA AGCTTATTAA CCCTGAGTAT ATTCTGTTTC CCCATTGGTC ATGGATTATT
CCGAAGGAGA TATTTGAAAA CTTTACGTGT GTGGTTTTCC ATATGACGGA CCTGCCTTTC
GGAAGGGGAG GAAGCCCACT TCAGAATCTT ATTGAAAGGG GAATCAAGAA AACAAAGATA
TCTGCCATAA AAGTGGACGG CGGAATAGAT ACCGGAGATA TATTCTTTAA AAGGGATTTG
GACCTTTACG GTACGGCAGA AGAGATTTTT ATGCGGGCGT CTAAAATAAT ATTTAACGAC
ATGATTCCGG AACTTCTCAC AAAAAGACCC GTACCGCAAA AGCAGGAGGG TGAAGCCACG
GTATTTCAGA GAAGAAAACC GGAGCAAAGC GAAATAAGCC CGGATTTTGA TTTGGAGAAA
ATATATGATT ATATCAGAAT GCTGGACGGA GAAGGATATC CCAGGGCATT TATTAAATAC
GGAAAGTACA GGCTGGAATT TTCAAGAGCA TCCATGAAAA ACGGAAAAAT TATTGCGGAC
GTGGAAATAA TAGAGGGTGA CGAAAATGAG TAA
 
Protein sequence
MNIIIATTKS WNIKNAQKFK KENESKYNTT IITNKDELTF EKVKLINPEY ILFPHWSWII 
PKEIFENFTC VVFHMTDLPF GRGGSPLQNL IERGIKKTKI SAIKVDGGID TGDIFFKRDL
DLYGTAEEIF MRASKIIFND MIPELLTKRP VPQKQEGEAT VFQRRKPEQS EISPDFDLEK
IYDYIRMLDG EGYPRAFIKY GKYRLEFSRA SMKNGKIIAD VEIIEGDENE