| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2205 |
|---|
| Symbol | |
|---|
| ID | 4811070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2634485 |
|---|
| End bp | 2635294 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640107611 |
|---|
| Product | cyanophycinase |
|---|
| Protein accession | YP_001038600 |
|---|
| Protein GI | 125974690 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4242] Cyanophycinase and related exopeptidases |
|---|
| TIGRFAM ID | [TIGR02069] cyanophycinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCAGA AAGTAAGGGG AAATTTGATT ATAATTGGCG GTGCCGAGGA CAAGGTCGGG
AAAAAAACCA TATTAAAGTA TGTTGCTGAC ATCGTCAGAG AAAAGAAAGG CAGTTTGGTG
ATATTGACCA CAGCAACCCA AAAGCCTCAG GAGGTCGGAA ACAATTACAG ACAGGTGTTT
GAAACGCTGG GATTAATGGA TATAGATGTG TTGAATATAA ATTCGCGCGA TGAGGCGGAC
TTGGACGAGA ATGCCGAAAG GATAAGAAGT TCCGGAGGTA TTTTCTTTAC CGGAGGGGAT
CAGCTCAGAA TAACAAGCAT TCTCGGAGGC ACAAAAGTAT ATAAAGCCCT GCATGAGGTC
TATTCAAAAG GTGTTGTGAT TGTTGGGACA AGTGCAGGGG CATCCGTTAT GAGCAATACG
ATGATAGTGG AAGGAAAGGA CAATGAGCCG GCAAGGAAAT GCACCATGAA AATGGCTCCG
GGATTGGGAT TTCTTGAAGA AGCCATAATT GACCAGCATT TTGACCAAAG GGGAAGAATA
GGAAGACTTC TTTGCGGTGT GGCGGAAAAC CCCTTTATGC TGGGAATAGG AATAGACGAG
GATACAGCCA TAAGAGTGTA TCCTGACGCT CATTTTGAGG TGCTGGGAAG CAATGCCGTT
ACAGTGATTG ACGGCAGCAC TATAAAAAGC ACCAATGTGT CTGAGCTCAA TCCTGATGAG
ATACTGGCAA TCTCCGGAGT AACGCTGCAC GTTTTGCCTT GCGGCTACGG ATTTGACATG
AAAAAAAAGA GAAGTAATTC AACCTACTGA
|
|---|
| Protein sequence | MGQKVRGNLI IIGGAEDKVG KKTILKYVAD IVREKKGSLV ILTTATQKPQ EVGNNYRQVF
ETLGLMDIDV LNINSRDEAD LDENAERIRS SGGIFFTGGD QLRITSILGG TKVYKALHEV
YSKGVVIVGT SAGASVMSNT MIVEGKDNEP ARKCTMKMAP GLGFLEEAII DQHFDQRGRI
GRLLCGVAEN PFMLGIGIDE DTAIRVYPDA HFEVLGSNAV TVIDGSTIKS TNVSELNPDE
ILAISGVTLH VLPCGYGFDM KKKRSNSTY
|
|---|
| |