| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2189 |
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| Symbol | |
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| ID | 4810905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2607494 |
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| End bp | 2608741 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640107595 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001038584 |
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| Protein GI | 125974674 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAAAGA AGACTTCAAA TAAAAATAAA AGTAAAAAGA AGCCCGGTTT TTTTACTTTA
TTGCTTTTTT CCCTAATTGC CGGTGCAGCT TTGGTCTGGC CTACTCACAT ATTGTTTTCC
TATTACGCTG AAAATCCTCT TCCCAATGTT CCTTTAATCT TGTTTGCTTC AATACACAGC
GGAATTTTGT ATGTTATAAT ATTTCAGGTC TCAGGCATAT TGATAAGAAA TTATTCCGTG
GAGCGTGCAA ATGAAAAGGA ACTTAAAAAC TTTAAAGATT TTACGGACAC AATTCACAGG
GCAGTAACGG AAATCGAAGC GTATCAAACC CTCTACGAGT TTATACAAAA AATTCGTGTG
AGCAGCCGCA TAACACTGTT CTACCGAAGG GAAGTATCTT CAAGTGAAAT AGTATGGGAG
AGACTTACAA AGGAAAGATT CCCTCTTTGC ACCATGGAAC CCAGGAACTG TCCTGTGGTC
AAGTATGGGC GGGAATGTCT GGTAAAGAAC ATTGCCACAG ACATACCATG TGCCAACCAG
CTTCCGGAGC ATAAATCAGG AAGCTACATT TGTCTGCCGA TAACCGAAGG AAATATAACA
TTGGGAATTT TACAGCTTTA TTCAAAATCA AAAAATTACT TTGATGAAGC TCTAATATCG
AAAGTCAAAT CTTACATAGA AGTCGCCAAG CCGGTTATCA GCAGTAAAAG GACATTGCAC
CAGCTTAGAA AGAATGCCAC CACTGACAAA CTTACCAAGC TTTACAACAG GAGATTTCTG
GAACAGTATC TTGACAATCA GCTTGAAATT ACCGGCTTCT CAAATCAAAA ATTAAGCGTC
ATCATGATGG ACATTGACAA CTTCAAACGG ATAAACGATA CTTACGGACA TAATGCCGGC
GATGCCGTCC TGGTTACATT TGCACGAGTT ATTTTGCGTT GTTTAAGGCA AACCGACCTT
GTTGCCCGTT ATGGAGGAGA GGAATTTATA GCAATACTTC CGTCCTCGGA CACCAAAAAC
GCCTATGACA TAGCAGAACG TATCAGGGAA TCCATAGCTG CGGAACCCAT GCCCAAAATA
AATGATGTCC AGCTCCCCAA TATAAGCTGC AGCTTCGGAG TCTCAACCTA CCCCACCCAT
GCAAAAAACA AAAATGACCT GATAAAAGCT GCGGATATAG CCTTGTACAA AGCAAAACAG
GCAGGCAAAA ACCGAGTCAT CACCTACTCT GAGGGTATGG AAATGTAG
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| Protein sequence | MSKKTSNKNK SKKKPGFFTL LLFSLIAGAA LVWPTHILFS YYAENPLPNV PLILFASIHS
GILYVIIFQV SGILIRNYSV ERANEKELKN FKDFTDTIHR AVTEIEAYQT LYEFIQKIRV
SSRITLFYRR EVSSSEIVWE RLTKERFPLC TMEPRNCPVV KYGRECLVKN IATDIPCANQ
LPEHKSGSYI CLPITEGNIT LGILQLYSKS KNYFDEALIS KVKSYIEVAK PVISSKRTLH
QLRKNATTDK LTKLYNRRFL EQYLDNQLEI TGFSNQKLSV IMMDIDNFKR INDTYGHNAG
DAVLVTFARV ILRCLRQTDL VARYGGEEFI AILPSSDTKN AYDIAERIRE SIAAEPMPKI
NDVQLPNISC SFGVSTYPTH AKNKNDLIKA ADIALYKAKQ AGKNRVITYS EGMEM
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