| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2119 |
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| Symbol | |
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| ID | 4810979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2516532 |
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| End bp | 2518814 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640107526 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001038519 |
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| Protein GI | 125974609 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTGTAG GAAAAGTTCT TGATATGGAT GAAAAGACGG CCATTATAAT GACTGATGAC
TTTGCTTTTC TGAATGTGGT AAGGACCTCT GAAATGGCAG TTGGTAAAAA AGTGAAGGTT
TTGGACTCGG ATATAATCAA GCCTAAAAAT TCTTTGCGCA GATATTTGCC GGTTGCGGCA
GTTGCTGCAT GCTTTGTAAT TGTGTTGTCT TTTGTGCTGA TGTTTATTAA TGGAAATACG
GCAAGAAAAA ATATATATGC TTATGTTGGC ATTGATATAA ATCCAAGTAT TGAGCTTTGG
ATAAATTACA ACAACAAAAT AGCCGAAGCC AAAGCACTGA ACGGCGATGC CGAGACAGTG
CTGGAAGGAC TTGAATTAAA AGAAAAAACA GTGGCGGAGG CTGTGAATGA GATTGTGCAA
AAGAGCATGG AGCTTGGATT TATTTCCAGG GAGAAGGAGA ATATAATCCT TATATCCACA
GCCTGTGATT TAAAAGCAGG GGAAGGTTCG GAGAATAAGG ACGTTCAAAA TAAAATCGGT
CAGCTTTTTG ATGATGTGAA CAAGGCGGTT TCAGACCTTA AAAACAGCGG TATTACAACC
AGGATTTTAA ATCTTACTTT GGAGGAAAGA GAATCATCCA AAGAAGAAAA TATTTCAATG
GGCAGATATG CCGTGTATTT AAAAGCCAAA GAGCAGAATG TAAATTTGAC TATTGATGAG
ATTAAAGATG CGGATTTGCT GGAGCTCATT GCCAAGGTCG GCATTGATAA TGAGAATGTT
CCGGAGGATA TTGTAACAGA GGATAAAGAC AACCTGGATG CGATAAATAC CGGACCTGCG
GAAAGTGCCG TGCCTGAAGT GACTGAAACT TTGCCTGCTA CCTCAACACC CGGCAGGACG
GAAGGTAACA CCGCGACAGG TTCGGTTGAC AGTACACCTG CTTTGTCCAA GAACGAAACA
CCGGGCAAAA CAGAAACACC GGGAAGGACA TTCAATACAC CGGCAAAATC GTCACTGGGG
CAATCTTCGA CGCCCAAGCC GGTATCACCC GTTCAAACGG CAACAGCGAC AAAGGGTATT
GGGACTTTGA CACCCAGGAA CTCACCGACG CCAGTAATAC CTTCCACCGG CATTCAATGG
ATTGACCAGG CAAATGAGAG AATAAATGAG ATTCGAAAGA GAAATGTACA GATAAAAGTT
GTGGATTCCA GCAACAAGCC GATAGAGAAT GCTTATGTGG AGGCGGTTCT CACCAACCAT
GCCTTTGGAT TTGGTACAGC CATTACAAGA AGGGCAATGT ACGATTCGAA TTACACTAAG
TTTATAAAAG ACCACTTTAA CTGGGCTGTG TTTGAAAATG AATCCAAATG GTATACAAAT
GAACCCAGTA TGGGAATTAT AACCTATGAC GATGCTGACT ATTTGTATGA ATTTTGCCGG
AGCAACGGAA TAAAAGTGAG GGGACACTGT ATTTTCTGGG AGGCTGAAGA GTGGCAGCCT
GCATGGGTAA GGAGTTTGGA TCCGTTTACC CTGCGTTTTG CGGTAGACAA CCGCTTAAAC
AGTGCTGTAG GTCATTTTAA AGGAAAATTC GAACATTGGG ATGTAAACAA CGAAATGATT
CACGGCAACT TTTTCAAGAG CCGTCTGGGT GAGTCCATCT GGCCTTATAT GTTCAACAGG
GCAAGAGAAA TTGATCCGAA TGCAAAGTAT TTTGTAAACA ACAATATAAC CACTTTGAAA
GAAGCGGATG ATTGTGTGGC CCTGGTAAAC TGGCTCAGAT CCCAGGGAGT TCGTGTGGAC
GGCGTAGGAG TGCACGGACA CTTTGGTGAC TCGGTGGACC GCAATCTTCT CAAAGGAATA
CTTGACAAGC TGTCTGTCTT GAACCTTCCG ATATGGATTA CCGAATATGA TTCGGTTACA
CCGGATGAAT ACAGGAGGGC GGACAATCTG GAGAACCTCT ATCGTACGGC TTTCAGCCAT
CCTTCCGTTG AAGGAATCGT AATGTGGGGT TTCTGGGAAA GAGTGCACTG GAGAGGAAGA
GATGCGTCAA TAGTAAATGA TAACTGGACG TTGAATGAAG CCGGCAGAAG GTTTGAGTCC
TTGATGAATG AGTGGACTAC CAGGGCTTAT GGAAGCACGG ATGGTTCGGG CAGCTTTGGC
TTCAGAGGAT TCTATGGAAC ATACAGGATA ACCGTGACAG TGCCGGGAAA AGGAAAGTAC
AACTATACTT TGAATCTGAA CCGCGGCAGC GGAACATTGC AGACTACTTA CAGAATTCCC
TGA
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| Protein sequence | MIVGKVLDMD EKTAIIMTDD FAFLNVVRTS EMAVGKKVKV LDSDIIKPKN SLRRYLPVAA
VAACFVIVLS FVLMFINGNT ARKNIYAYVG IDINPSIELW INYNNKIAEA KALNGDAETV
LEGLELKEKT VAEAVNEIVQ KSMELGFISR EKENIILIST ACDLKAGEGS ENKDVQNKIG
QLFDDVNKAV SDLKNSGITT RILNLTLEER ESSKEENISM GRYAVYLKAK EQNVNLTIDE
IKDADLLELI AKVGIDNENV PEDIVTEDKD NLDAINTGPA ESAVPEVTET LPATSTPGRT
EGNTATGSVD STPALSKNET PGKTETPGRT FNTPAKSSLG QSSTPKPVSP VQTATATKGI
GTLTPRNSPT PVIPSTGIQW IDQANERINE IRKRNVQIKV VDSSNKPIEN AYVEAVLTNH
AFGFGTAITR RAMYDSNYTK FIKDHFNWAV FENESKWYTN EPSMGIITYD DADYLYEFCR
SNGIKVRGHC IFWEAEEWQP AWVRSLDPFT LRFAVDNRLN SAVGHFKGKF EHWDVNNEMI
HGNFFKSRLG ESIWPYMFNR AREIDPNAKY FVNNNITTLK EADDCVALVN WLRSQGVRVD
GVGVHGHFGD SVDRNLLKGI LDKLSVLNLP IWITEYDSVT PDEYRRADNL ENLYRTAFSH
PSVEGIVMWG FWERVHWRGR DASIVNDNWT LNEAGRRFES LMNEWTTRAY GSTDGSGSFG
FRGFYGTYRI TVTVPGKGKY NYTLNLNRGS GTLQTTYRIP
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