Gene Cthe_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2118 
Symbol 
ID4810978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2515699 
End bp2516451 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content41% 
IMG OID640107525 
ProductABC transporter related protein 
Protein accessionYP_001038518 
Protein GI125974608 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCA AGATAAAGAT TGAAAATTTA AGCAAAACCT TTAAAGTGAA TAAAAAACCT 
CTGGAGGTTT TAAACAATAT AAATATTGAG GTCTATGAAA ACCAGTTTGT TTCCCTGATT
GGTCCCAGCG GCTGCGGCAA AAGCACAATT TTTCGTATTT TGGCCGGACT TGAAAAGGAC
TTTTCAGGAA ACATAACGGT AAACGGAGAA AGCATAAAAG CTTCCTCCTG CCAGTTCGGT
TACATGCCTC AAAAGGACGT TTTAATGCCC TGGCGCACAG TATACAAAAA CATCATTCTT
CCCCTTGAAA TAAACGGCAA AAAGGACAGG TCCAAAAAAA CCGAAGTGGA AAACCTCATA
AAGGAATTTG GTCTTGAAGG TTTCGAAAAC TTCTATCCGG GGGAAATATC CGGCGGAATG
AAGCAAAGAG CAGGTATTCT TCGCACTTTT TTAATGGAAA GCGACATAAT GCTTCTTGAC
GAACCCTTTG GTGCGCTTGA TGCAATAACC CGGATAAATA TGCAGGAATG GCTGCTGAAA
GTCCTGGTTG AGCACAAAAA GACCGTATTG TTTATAACCC ACGACATTGA AGAGGCAATC
TTTCTGTCGG ACAGGGTGTA TGTCCTGTCC GGCAGACCTG CCCATGTTAT AAAAACTTTG
GATATAGAGT TTCCCCGACC AAGGGACAGA GAAGTGCTTT CTTCTCCAAA ATTTCTGGAA
TACAAAGATG CTCTTTTGAA AGCCCTTCTC TGA
 
Protein sequence
MNIKIKIENL SKTFKVNKKP LEVLNNINIE VYENQFVSLI GPSGCGKSTI FRILAGLEKD 
FSGNITVNGE SIKASSCQFG YMPQKDVLMP WRTVYKNIIL PLEINGKKDR SKKTEVENLI
KEFGLEGFEN FYPGEISGGM KQRAGILRTF LMESDIMLLD EPFGALDAIT RINMQEWLLK
VLVEHKKTVL FITHDIEEAI FLSDRVYVLS GRPAHVIKTL DIEFPRPRDR EVLSSPKFLE
YKDALLKALL