Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2118 |
Symbol | |
ID | 4810978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 2515699 |
End bp | 2516451 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640107525 |
Product | ABC transporter related protein |
Protein accession | YP_001038518 |
Protein GI | 125974608 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATCA AGATAAAGAT TGAAAATTTA AGCAAAACCT TTAAAGTGAA TAAAAAACCT CTGGAGGTTT TAAACAATAT AAATATTGAG GTCTATGAAA ACCAGTTTGT TTCCCTGATT GGTCCCAGCG GCTGCGGCAA AAGCACAATT TTTCGTATTT TGGCCGGACT TGAAAAGGAC TTTTCAGGAA ACATAACGGT AAACGGAGAA AGCATAAAAG CTTCCTCCTG CCAGTTCGGT TACATGCCTC AAAAGGACGT TTTAATGCCC TGGCGCACAG TATACAAAAA CATCATTCTT CCCCTTGAAA TAAACGGCAA AAAGGACAGG TCCAAAAAAA CCGAAGTGGA AAACCTCATA AAGGAATTTG GTCTTGAAGG TTTCGAAAAC TTCTATCCGG GGGAAATATC CGGCGGAATG AAGCAAAGAG CAGGTATTCT TCGCACTTTT TTAATGGAAA GCGACATAAT GCTTCTTGAC GAACCCTTTG GTGCGCTTGA TGCAATAACC CGGATAAATA TGCAGGAATG GCTGCTGAAA GTCCTGGTTG AGCACAAAAA GACCGTATTG TTTATAACCC ACGACATTGA AGAGGCAATC TTTCTGTCGG ACAGGGTGTA TGTCCTGTCC GGCAGACCTG CCCATGTTAT AAAAACTTTG GATATAGAGT TTCCCCGACC AAGGGACAGA GAAGTGCTTT CTTCTCCAAA ATTTCTGGAA TACAAAGATG CTCTTTTGAA AGCCCTTCTC TGA
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Protein sequence | MNIKIKIENL SKTFKVNKKP LEVLNNINIE VYENQFVSLI GPSGCGKSTI FRILAGLEKD FSGNITVNGE SIKASSCQFG YMPQKDVLMP WRTVYKNIIL PLEINGKKDR SKKTEVENLI KEFGLEGFEN FYPGEISGGM KQRAGILRTF LMESDIMLLD EPFGALDAIT RINMQEWLLK VLVEHKKTVL FITHDIEEAI FLSDRVYVLS GRPAHVIKTL DIEFPRPRDR EVLSSPKFLE YKDALLKALL
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