Gene Cthe_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2107 
Symbol 
ID4810967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2501823 
End bp2502506 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content42% 
IMG OID640107514 
Productthymidylate kinase 
Protein accessionYP_001038507 
Protein GI125974597 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0970405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGCA AGCTTATAAT AATTGAGAGC GGAGCCGATG CCAGCGGTAA GGCCACTCAG 
ACCAACAAGC TGTATGAACG GCTGGTGCAG GAGGGATATA AAGTAAAAAA AATTACTTTT 
CCGAACTATG ACAGCGATTC TTCAGCTTTG GTTAAAATGT ACTTAAACGG TGATTTCGGA 
AAAGACCCCA ATGATGTAAG TCCTTATGTG GCCTCCACAT TTTATGCGGT GGACAGGTTT 
GCATCTTACA GGACTGAGTG GGGACAGGCT TATAATGACG GATGGATAAT TCTTGCCGAC 
AGGTACACCA CATCCAACAT GGTGCATCAG GCCGCAAAAA TTAAGGATAT GGAAGAGAAA 
GACCGCTTTC TTGACTGGCT GTGGAACTTT GAATTTGAGA TTTATAAACT CCCGGTGCCC 
GACTGCGTGA TATTTCTGGA CATGCCCCCC TCTTTCAGCA GGGAGCTTAT GAAAGAAAGG 
GCAAACAAAT TTACCGGGGA GCAGAAAAAA GATATACATG AGAGAAATGA CGAGTATTTG 
GTGGAATCAT ACAGGAATTC TTTGTATGTT GCCAAAAAAT ACAATTGGAT TAAAATCGAA 
TGTGTAAAGG ACGGAGTTTT AAAAAAGATA GATGAAATTC AAAAAGAAGT TTACGAAGCT 
GTAAGTGGGA TAATCAGGCA GTAA
 
Protein sequence
MKGKLIIIES GADASGKATQ TNKLYERLVQ EGYKVKKITF PNYDSDSSAL VKMYLNGDFG 
KDPNDVSPYV ASTFYAVDRF ASYRTEWGQA YNDGWIILAD RYTTSNMVHQ AAKIKDMEEK 
DRFLDWLWNF EFEIYKLPVP DCVIFLDMPP SFSRELMKER ANKFTGEQKK DIHERNDEYL 
VESYRNSLYV AKKYNWIKIE CVKDGVLKKI DEIQKEVYEA VSGIIRQ