| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2095 |
|---|
| Symbol | |
|---|
| ID | 4810955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2491052 |
|---|
| End bp | 2491819 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640107502 |
|---|
| Product | TatD family hydrolase |
|---|
| Protein accession | YP_001038495 |
|---|
| Protein GI | 125974585 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0084] Mg-dependent DNase |
|---|
| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTTTG ACTCACATGC ACATTACGAT AATAAAAGGT TTGATGAAGA CAGGTTTGAA
GTGATAAAAA AGGCCTATGA CAGCGGCGTT TCCTACATTT TAAACGCCGC CGCCGACATG
GCTTCCTCGC TGGAAACCGT TTCACTTACC CGTAAATTTG ATTTTATTTA CGGAGCCGTG
GGGGTTCATC CCCATGAGGT GGCCAAAATG AGTGACGATG ACATTGAGAA GCTTAAAGAC
TTTGCAAAAG AGGAGAAAAT TGTCGCAATT GGGGAGATAG GGCTTGACTA TTATTATGAT
TTTTCACCGA GGGAGCAGCA GAAGCTCTGG TTTGCAAGGC AGATAAACCT GGCGAAAGAA
CTTAACCTTC CTATAATTGT CCACGACAGG GACGCCCACA AGGACGTCCT TGACATAGTG
AAGGCCGAGC AGGCAAAGGA TGTCGGGGGA GTGTTCCACT GCTATTCGGG AAGTGTTGAG
ATGCTTAAGG ATGTGCTGGA AAACAACTTT TACATTTCAG TGGGCGGAAC ACTGACATTC
AAAAATGCAA AAAGGGTTGT TGAAGTTGTG GAACGTGTGC CTTTAGACAG GCTTCTGATA
GAGACCGACT GCCCGTATCT GACCCCTGAA CCCCACAGGG GGAAGAGAAA TGATTCAAGC
TATGTAAGGC TCGTGGCGGA AAAAATTGCA AAGATAAGGG GCATGAGTTT TGAAGAAGTG
GCCGAAATCA CGACTAATAA CGCCAAAAGG CTTTTTGGTA TAAAGTAA
|
|---|
| Protein sequence | MLFDSHAHYD NKRFDEDRFE VIKKAYDSGV SYILNAAADM ASSLETVSLT RKFDFIYGAV
GVHPHEVAKM SDDDIEKLKD FAKEEKIVAI GEIGLDYYYD FSPREQQKLW FARQINLAKE
LNLPIIVHDR DAHKDVLDIV KAEQAKDVGG VFHCYSGSVE MLKDVLENNF YISVGGTLTF
KNAKRVVEVV ERVPLDRLLI ETDCPYLTPE PHRGKRNDSS YVRLVAEKIA KIRGMSFEEV
AEITTNNAKR LFGIK
|
|---|
| |