Gene Cthe_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2080 
Symbol 
ID4810678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2472929 
End bp2473501 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content38% 
IMG OID640107487 
ProductNUDIX hydrolase 
Protein accessionYP_001038480 
Protein GI125974570 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.397171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATGA GGAGCTTTGC AGGCGGAGTG GTGTTCTCGG GAGACAAGGT TCTTCTTTTT 
AAAAATGAGA GGAATGAGTG GATGCTTCCG AGAGGCAAGA TGCACGACGG AGAAATTTCG 
AGTGAAGCAG CGGTAAGAAG AATCATGGAG GAATCCGGGA TAGCCACTGA AATCATATAC 
ACAGCCGGGC AGACCAACTA TGAATTCTCA TCCACGACGC ATAAAAAACC CTTCTGCAAT 
AAAACCACGT GGTACATTAT GAAATCCCTT GACGAGGAAA ATAAAATAAT GAAGATAAGA 
AGAAAAAACA GTTCACGATT CATGGACTTT GTTAAGGTTG ACGAAGCCAT GAATCTTATT 
AATTCAGGTC ATGACAGATC CCTGGTAAGC CTGTCATATA GGAAATACCG TGAATTGGAG 
CAGAATAAGG AATGCAATTT GAATAAAAAG TGTAATTTGG ATAAAAAATG TGATTTAGCT 
AAGAGCCGTG ATTTAAATAA AGAATACGAT TTGGATAAAG AGTGTGATTT AAGTAAAGAA 
TATGATTTAA ATAAAGAGTA TGCTTTAAAT TAA
 
Protein sequence
MLMRSFAGGV VFSGDKVLLF KNERNEWMLP RGKMHDGEIS SEAAVRRIME ESGIATEIIY 
TAGQTNYEFS STTHKKPFCN KTTWYIMKSL DEENKIMKIR RKNSSRFMDF VKVDEAMNLI 
NSGHDRSLVS LSYRKYRELE QNKECNLNKK CNLDKKCDLA KSRDLNKEYD LDKECDLSKE 
YDLNKEYALN