Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2080 |
Symbol | |
ID | 4810678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2472929 |
End bp | 2473501 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640107487 |
Product | NUDIX hydrolase |
Protein accession | YP_001038480 |
Protein GI | 125974570 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.397171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATGA GGAGCTTTGC AGGCGGAGTG GTGTTCTCGG GAGACAAGGT TCTTCTTTTT AAAAATGAGA GGAATGAGTG GATGCTTCCG AGAGGCAAGA TGCACGACGG AGAAATTTCG AGTGAAGCAG CGGTAAGAAG AATCATGGAG GAATCCGGGA TAGCCACTGA AATCATATAC ACAGCCGGGC AGACCAACTA TGAATTCTCA TCCACGACGC ATAAAAAACC CTTCTGCAAT AAAACCACGT GGTACATTAT GAAATCCCTT GACGAGGAAA ATAAAATAAT GAAGATAAGA AGAAAAAACA GTTCACGATT CATGGACTTT GTTAAGGTTG ACGAAGCCAT GAATCTTATT AATTCAGGTC ATGACAGATC CCTGGTAAGC CTGTCATATA GGAAATACCG TGAATTGGAG CAGAATAAGG AATGCAATTT GAATAAAAAG TGTAATTTGG ATAAAAAATG TGATTTAGCT AAGAGCCGTG ATTTAAATAA AGAATACGAT TTGGATAAAG AGTGTGATTT AAGTAAAGAA TATGATTTAA ATAAAGAGTA TGCTTTAAAT TAA
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Protein sequence | MLMRSFAGGV VFSGDKVLLF KNERNEWMLP RGKMHDGEIS SEAAVRRIME ESGIATEIIY TAGQTNYEFS STTHKKPFCN KTTWYIMKSL DEENKIMKIR RKNSSRFMDF VKVDEAMNLI NSGHDRSLVS LSYRKYRELE QNKECNLNKK CNLDKKCDLA KSRDLNKEYD LDKECDLSKE YDLNKEYALN
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