| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2058 |
|---|
| Symbol | |
|---|
| ID | 4810654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2449203 |
|---|
| End bp | 2449730 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640107463 |
|---|
| Product | Appr-1-p processing protein |
|---|
| Protein accession | YP_001038458 |
|---|
| Protein GI | 125974548 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGTA TTCACATAAT TCAAGGAGAT ATAACAAAGA TTGAAGCCGA TGCCATAGTA
AATGCGGCAA ACAGGACGTT GCTTGGAGGC GGAGGAGTGG ATGGCGCCAT TCACCGGGCC
GCCGGACCGG AACTTCTTGA GGAGTGTCGA AAATTGAACG GCTGTGAAAC CGGGGAAGCC
AAGATTACCA AGGGGTATAA ACTTCCTGCA AAATATGTTA TACATACGGT AGGGCCGGTT
TGGAAGGGTG GAGATAAAAA TGAAGACCAG TTGCTTGCGT CTTGTTATCG GAATTCTTTG
AAGCTTGCCG TGGAGAACGG AATAAAGACA ATTGCGTTTC CGTCAATTAG TACGGGTGCT
TACCGTTTCC CTGTAGAACG GGCCGCAAGA ATTGCCATGC AGGAAATATC CGAGTTTTTA
AGAGAGGACA GCAGCATTGA AAAGGTGTTT ATGGTTTGTT TTGATGAGGG AACTATGCAG
GCTTATATGG AGGCTTATAA AGAGATTGAG AAAAATGGGG CAGTTTAA
|
|---|
| Protein sequence | MERIHIIQGD ITKIEADAIV NAANRTLLGG GGVDGAIHRA AGPELLEECR KLNGCETGEA
KITKGYKLPA KYVIHTVGPV WKGGDKNEDQ LLASCYRNSL KLAVENGIKT IAFPSISTGA
YRFPVERAAR IAMQEISEFL REDSSIEKVF MVCFDEGTMQ AYMEAYKEIE KNGAV
|
|---|
| |