| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2030 |
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| Symbol | |
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| ID | 4811000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2406778 |
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| End bp | 2408454 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640107439 |
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| Product | hypothetical protein |
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| Protein accession | YP_001038434 |
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| Protein GI | 125974524 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00279579 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACTA TAACGTTATA TGCCGGAAAA ATCAACCAAA TGCCCGGATT GATAAAAGAA
GTCAAGAAAT CTGTGGTGGA TTACAAGTCA GAATTATCCG CATTGAGAAA GAAAACTTTG
AACATCAACA GAAGTGTATG CAATTTGGAT GAAGTAATAA GTTCCATACA GGCATCTTCC
CAGACTCAGG ATAGAAAAAT TGATTCACTT GAGAAATTCT GCAGTGAAAG TGAGAAGTTC
ATATCGGAAG TAGTACGTAT TGATGAAGAA GTTGCTGAGC TTATCAATAA ACGGAAAGAA
AATTTTTACA AAGAATATTA TTATTTAAAA CCGGAAAGCG AGAAAAGCGG CTGGGAAAAA
ATCAAGGACG GCTTAAAGTC GGTTGCGGAG TGGTGTAAAG AGAATTGGAA ATCCATTGCT
AAAATAGTAG TTGCGGCGGT AGTTATTGCA GGATTGGGGA TAGCGGCGGC TTTGACAGGC
GGGATATTGG GAGTCGTACT GGCAGGAGCA TTCTGGGGAG CATTGGCCGG AGGATTGATA
GGGGGAGCGG TTGGAGGAAT AGCCGCTGCG ATAAATGGAG GATCGTTTCT GGAAGGATTT
GCGGACGGCG CTTTAAGCGG AGCAATTTCC GGGGCTGTGA CAGGAGCGGC ATGTGCCGGG
CTTGGTGCTT TGGGAGCTCT AGCAGGGAAA AGTATCCAAT GCATGAGCAC AGTGGGAAAA
GCGATAAATG TTACATCAAA GGTTACGGCA GCACTCTCGT TTGGTATGGA TGGATTTGAC
ATGCTGGCAA TGGGAGTATC ATTGTTTGAA CCATCCAATG CATTGGTTGA ATTTAACCGG
AAGCTGCATT CCAATGCATT TTATAACGGA TTCCAGATTG CTGTAAACGC GCTGGCTGTT
TTCACTGCCG GGGCGGCATC GACAATGAAG TGCTTTGTTG CAGGTACGCT GATATTAACT
GCGACAGGCT TGGTTGCGAT AGAGAATATC AAGGCAGGGG ACAAGGTAAT TGCGACGAAT
CCGGAGACTT TTGAAGTAGC CGAGAAGACA GTGCTTGAGA CATATGTGAG AGAGACGACG
GAGCTTTTGA ATTTGACAAT CAATGGAGAG GTAATCAAGA CAACCTTTGA GCATCCGTTT
TATGTTAAAG ATGTGGGTTT TGTTGAAGCG GGAAAACTGC AAGTAGGAGA TAAGTTGGTT
GATTCAAGAG GTAATGTTTT AGTATTGGAA GGTAAAAAGC TTGAAATAAC AGATAAGCCT
GTAAAGGTTT ACAATTTTAA GGTCGATAAT TTTCATACGT ATCATGTTGG CGAAAATAGG
GTATTGGTTC ATAATGCGAA TAAGTATGTT AAGGGAACGA GTAAGACTGA GATAATTGGT
AAGCCACATG CTTCAGCTCA ACATCAAGCT TTTACTATGG ACGAAGTAAA TAAGTTATCT
TCAACAGGTG AATTCTCAAA AATATACATA AATAAGTCTT TAAAAACTGC AGGTTTTAAT
GGAACACAAA AACCTGATAT AATTGCAGTA GGGAAAAACG GAAATGGACA TATTGTTGAG
ATTGCCGGTC CTAGTCAGTT ATCAGGTAAA CCTAAGTATG CTCTAAAGAA CAAATTCAAT
ACTATGTTAC AAAATAACCC TGGAATGACT GGTGATTTGA TATTCCCTGA ATATTAA
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| Protein sequence | MATITLYAGK INQMPGLIKE VKKSVVDYKS ELSALRKKTL NINRSVCNLD EVISSIQASS
QTQDRKIDSL EKFCSESEKF ISEVVRIDEE VAELINKRKE NFYKEYYYLK PESEKSGWEK
IKDGLKSVAE WCKENWKSIA KIVVAAVVIA GLGIAAALTG GILGVVLAGA FWGALAGGLI
GGAVGGIAAA INGGSFLEGF ADGALSGAIS GAVTGAACAG LGALGALAGK SIQCMSTVGK
AINVTSKVTA ALSFGMDGFD MLAMGVSLFE PSNALVEFNR KLHSNAFYNG FQIAVNALAV
FTAGAASTMK CFVAGTLILT ATGLVAIENI KAGDKVIATN PETFEVAEKT VLETYVRETT
ELLNLTINGE VIKTTFEHPF YVKDVGFVEA GKLQVGDKLV DSRGNVLVLE GKKLEITDKP
VKVYNFKVDN FHTYHVGENR VLVHNANKYV KGTSKTEIIG KPHASAQHQA FTMDEVNKLS
STGEFSKIYI NKSLKTAGFN GTQKPDIIAV GKNGNGHIVE IAGPSQLSGK PKYALKNKFN
TMLQNNPGMT GDLIFPEY
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