| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2024 |
|---|
| Symbol | |
|---|
| ID | 4810994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2402349 |
|---|
| End bp | 2403539 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640107433 |
|---|
| Product | transposase IS116/IS110/IS902 |
|---|
| Protein accession | YP_001038428 |
|---|
| Protein GI | 125974518 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000259984 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAGG AAAAGCATTG TGCAGTTGTG ATTGATTGCT GGATGGAAAA AATCGGAGAA
GTCAACTTTG AAAACAAACC ATCCAAGTTT CCAGCATTTG TTGAGGAGAT TAGGAAAATA
TGCGGTACAA AGGACTTTGT ATTTGGGCTT GAGGATACCA GAGGTTTTGG CCGTAATCTG
GCTTCATATC TTACAGGAAG AAAGTTTGAA GTCAAACATG TGAATCCAGT ATATACCAGT
GCAATAAGAC TTTCAAATCC TATTATATAC AAGGATGATT CTTATGATGC CTATTGTGTT
GCAAGGGTAT TAAGGGATAT GGTGGATACA TTACAGGATG CAAAACATGA GGATATATAT
TGGGCAATCA GACAGTTGGT AAAAAGAAGA GAAATAATAG TCAAATATAA TGTTATGAAC
AAAAATCAAT TACATAGTCA GTTGTCTTAT GGTTACCCAT CCTATAAGAA GTTCTTTTCA
CAAATTGATG GAAAAAGTGC ATTGTGTTTC TGGGAGAACT ATCCTTCACC AGAGCATATT
TGGTGTACTA CACCAGAACA AATTTATGAA ACAATAAAAG CAGTACATCA GGCATTCAAG
ATAGAGCGTG TTCATGCAAT TATTGATATG ATTAAAAAGG ATGGAAATAC ACAGAAGGGG
TATCAGGAAG AAAGAGATAC AATAGTAAGA AACATCGTAA AAGATATTAA GAACAATCAA
GAGCTATTAA AAGACATAGA AAAGCAGTTA AGAAAATTAT TGCCACAGAC AGGGTATAAG
CTGCAAACTA TGCCAGGGAT AGACCTTATC ACAGAAGCAA AGATTGTGTC TGAAATTGGT
GATATTAACA GATTTCCAAA TTCAGATAAG TTAGCTCGTT TTATGGGGTT AGCGCCTGTA
CATTTTAGTT CAGCAGGTAA AGGTAAGGAA GAAAGGTGTA GAAATGGAAA CAGAGAGTTA
AATGCTATAT TTCATTTTTT GGCTATACAA ATGGTAGCTG TATCACCTTC AGGAAAGCCA
AGGCATCCAG TATTCAGAGA GTATTTTGAA CAGAAGGTCA AAGAGGGTAA AAACAAGCCA
CAGGCTCTTA TATGTATATC AAGAACGCTT GTAAGATTAA TCTACGGTAT GATGAAGACA
AAGACAGAGT ATAGACCGTA TGAGAAGAAA GAAGAAGAAG GAAATAATTA G
|
|---|
| Protein sequence | MHKEKHCAVV IDCWMEKIGE VNFENKPSKF PAFVEEIRKI CGTKDFVFGL EDTRGFGRNL
ASYLTGRKFE VKHVNPVYTS AIRLSNPIIY KDDSYDAYCV ARVLRDMVDT LQDAKHEDIY
WAIRQLVKRR EIIVKYNVMN KNQLHSQLSY GYPSYKKFFS QIDGKSALCF WENYPSPEHI
WCTTPEQIYE TIKAVHQAFK IERVHAIIDM IKKDGNTQKG YQEERDTIVR NIVKDIKNNQ
ELLKDIEKQL RKLLPQTGYK LQTMPGIDLI TEAKIVSEIG DINRFPNSDK LARFMGLAPV
HFSSAGKGKE ERCRNGNREL NAIFHFLAIQ MVAVSPSGKP RHPVFREYFE QKVKEGKNKP
QALICISRTL VRLIYGMMKT KTEYRPYEKK EEEGNN
|
|---|
| |