| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1979 |
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| Symbol | |
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| ID | 4810911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2358607 |
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| End bp | 2359959 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640107395 |
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| Product | hypothetical protein |
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| Protein accession | YP_001038390 |
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| Protein GI | 125974480 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0026503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACTA TAACGTTATA TGCCGGGAAA ATCAACCAAA TGCCCGGATT GATAAATGAA
GTCAAGAAAT CTGTGGTGGA TTACAAGTCA GAATTATCCG CATTGAGAAA GAAAACTTTG
AACATCAACA GAAGTGTATG CAATTTGGAT GAAGTAATAA GTTCCATACA GGCATCTTCC
CAGACTCAGG ATAGAAAAAT TGATTCACTT GAGAAATTCT GCAGTGAAAG TGAGAAGTTT
ATATCGGAAG TAATACGTAT TGATGAAGAA GTTGCTGAGC TTATCAATAA ACGGAAAGAA
AATTTTTACA AAGAATATTA TTATTTAAAA CCGGAAAGCG AGAAAAGCGG CTGGGAAAAA
ATCAAGGACG GCTTAAAGTC GGTTGCGGAG TGGTGTAAAG AGAATTGGAA ATCCATTGCT
AAAATAGTAG TTGCGGCGGT AGTTATTGCA GGATTGGGGA TAGCGGCGGC TTTGACAGGC
GGGATATTGG GAGTCGTACT GGCAGGAGCA TTCTGGGGAG CATTGGCCGG AGGATTGATA
GGGGGAGCGG TTGGAGGAAT AGCCGCTGCG ATAAATGGAG GATCGTTTCT GGAAGGATTT
GCGGACGGGG CATTAAGCGG AGCAATTTCC GGGGCTGTGA CAGGAGCGGC ATGTGCCGGG
CTTGGTGCTT TGGGAGCTCT AGCAGGGAAA AGTATCCAAT GCATGAGCAC AGTGGGAAAA
GCGATAAATG TTACATCAAA GGTTACGGCA GCACTCTCGT TTGGTATGGA TGGATTTGAC
ATGCTGGCAA TGGGAGTATC ATTGTTTGAT CCATCCAATG CATTGGTTGA ATTTAACCGG
AAGCTGCATT CCAATGCATT TTATAACGGA TTCCAGATTG CTGTAAACGC GCTGGCTGTT
TTCACTGCCG GGGCGGCATC TACAATGAAG TGCTTTGTTG CAGGTACAAT GATATTGACT
GTGGCAGGCT TGGTTGCGAT AGAGAATATC AAGGCAGGGG ACAAGGTAAT TGCGACGAAT
CCGGAGACTT TTGAAGTAGC GGAAAAGACA GTGCTTGAGA CATATGTGAG AGATACGACG
GAGCTTTTGC ATTTGGCAAT CAATGGAGAG GTAATCAAGA CAACCTTTGA GCATCCGTTT
TATGTAAAAG ATGTGGACTT TGTTGAAGCG GGAAAACTGC AGGTAGGAGA TAAGCTGCTT
GATTCAAAAG GCAATGTTTT GGTGGTGGAG GATAAAAAGC TTGAGATTAC AGATGAGCCT
GTCAAGGTTT ATAACTTCAA GGTAGATGAT TTTCATACTT ATCATGTTGG CAATAATGGA
ATATTGGTGC ATAATGCAAA TAATTTATCT TAA
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| Protein sequence | MATITLYAGK INQMPGLINE VKKSVVDYKS ELSALRKKTL NINRSVCNLD EVISSIQASS
QTQDRKIDSL EKFCSESEKF ISEVIRIDEE VAELINKRKE NFYKEYYYLK PESEKSGWEK
IKDGLKSVAE WCKENWKSIA KIVVAAVVIA GLGIAAALTG GILGVVLAGA FWGALAGGLI
GGAVGGIAAA INGGSFLEGF ADGALSGAIS GAVTGAACAG LGALGALAGK SIQCMSTVGK
AINVTSKVTA ALSFGMDGFD MLAMGVSLFD PSNALVEFNR KLHSNAFYNG FQIAVNALAV
FTAGAASTMK CFVAGTMILT VAGLVAIENI KAGDKVIATN PETFEVAEKT VLETYVRDTT
ELLHLAINGE VIKTTFEHPF YVKDVDFVEA GKLQVGDKLL DSKGNVLVVE DKKLEITDEP
VKVYNFKVDD FHTYHVGNNG ILVHNANNLS
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