| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1963 |
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| Symbol | |
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| ID | 4810746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2340386 |
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| End bp | 2342899 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640107379 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001038374 |
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| Protein GI | 125974464 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.658538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAGAA AACTTTTCAG TGTATTACTT GTTGGCTTGA TGCTTATGAC ATCGTTGCTT
GTCACAATAA GCAGTACATC AGCGGCATCC TTGCCAACCA TGCCGCCTTC GGGATATGAC
CAGGTAAGGA ACGGCGTTCC GAGAGGGCAG GTCGTAAATA TTTCTTATTT CTCCACGGCC
ACCAACAGTA CCAGGCCGGC AAGAGTTTAT TTGCCGCCGG GATATTCAAA GGACAAAAAA
TACAGTGTTT TGTATCTCTT ACACGGCATA GGCGGTAGTG AAAACGACTG GTTCGAAGGG
GGAGGCAGAG CCAATGTTAT TGCCGACAAT CTGATTGCCG AGGGAAAAAT CAAGCCCCTG
ATAATTGTAA CACCGAATAC TAACGCCGCC GGTCCGGGAA TAGCGGACGG TTATGAAAAT
TTCACAAAAG ATTTGCTCAA CAGTCTTATT CCCTATATCG AATCTAACTA TTCAGTCTAC
ACCGACCGCG AACATCGGGC GATTGCAGGA CTTTCAATGG GTGGAGGACA ATCGTTTAAT
ATTGGATTGA CCAATCTCGA TAAATTTGCC TATATTGGCC CGATTTCAGC GGCTCCAAAC
ACTTATCCAA ATGAGAGGCT TTTTCCTGAC GGAGGAAAAG CTGCAAGGGA GAAATTGAAA
CTGCTCTTTA TTGCCTGCGG AACCAATGAC AGTCTGATAG GTTTTGGACA GAGAGTACAT
GAATATTGCG TTGCCAACAA CATTAACCAT GTCTATTGGC TTATTCAGGG CGGAGGACAC
GATTTTAATG TGTGGAAGCC CGGATTGTGG AATTTCCTTC AAATGGCAGA TGAAGCCGGA
TTGACGAGGG ATGGAAACAC TCCGGTTCCG ACACCCAGTC CAAAGCCGGC TAACACACGT
ATTGAAGCGG AAGATTATGA CGGTATTAAT TCTTCAAGTA TTGAGATAAT AGGTGTTCCA
CCTGAAGGAG GCAGAGGAAT AGGTTATATT ACCAGTGGTG ATTATCTGGT ATACAAGAGT
ATAGACTTTG GAAACGGAGC AACGTCGTTT AAGGCCAAGG TTGCAAATGC AAATACTTCC
AATATTGAAC TTAGATTAAA CGGTCCGAAT GGTACTCTCA TAGGCACACT CTCGGTAAAA
TCCACAGGAG ATTGGAATAC ATATGAGGAG CAAACTTGCA GCATTAGCAA AGTCACCGGA
ATAAATGATT TGTACTTGGT ATTCAAAGGC CCTGTAAACA TAGACTGGTT CACTTTTGGC
GTTGAAAGCA GTTCCACAGG TCTGGGGGAT TTAAATGGTG ACGGAAATAT TAACTCGTCG
GACCTTCAGG CGTTAAAGAG GCATTTGCTC GGTATATCAC CGCTTACGGG AGAGGCTCTT
TTAAGAGCGG ATGTAAATAG GAGCGGCAAA GTGGATTCTA CTGACTATTC AGTGCTGAAA
AGATATATAC TCCGCATTAT TACAGAGTTC CCCGGACAAG GTGATGTACA GACACCCAAT
CCGTCTGTTA CTCCGACACA AACTCCTATC CCCACGATTT CGGGAAATGC TCTTAGGGAT
TATGCGGAGG CAAGGGGAAT AAAAATCGGA ACATGTGTCA ACTATCCGTT TTACAACAAT
TCAGATCCAA CCTACAACAG CATTTTGCAA AGAGAATTTT CAATGGTTGT ATGTGAAAAT
GAAATGAAGT TTGATGCTTT GCAGCCGAGA CAAAACGTTT TTGATTTTTC GAAAGGAGAC
CAGTTGCTTG CTTTTGCAGA AAGAAACGGT ATGCAGATGA GGGGACATAC GTTGATTTGG
CACAATCAAA ACCCGTCATG GCTTACAAAC GGTAACTGGA ACCGGGATTC GCTGCTTGCG
GTAATGAAAA ATCACATTAC CACTGTTATG ACCCATTACA AAGGTAAAAT TGTTGAGTGG
GATGTGGCAA ACGAATGTAT GGATGATTCC GGCAACGGCT TAAGAAGCAG CATATGGAGA
AATGTAATCG GTCAGGACTA CCTTGACTAT GCTTTCAGGT ATGCAAGAGA AGCAGATCCC
GATGCACTTC TTTTCTACAA TGATTATAAT ATTGAAGACT TGGGTCCAAA GTCCAATGCG
GTATTTAACA TGATTAAAAG TATGAAGGAA AGAGGTGTGC CGATTGACGG AGTAGGATTC
CAATGCCACT TTATCAATGG AATGAGCCCC GAGTACCTTG CCAGCATTGA TCAAAATATT
AAGAGATATG CGGAAATAGG CGTTATAGTA TCCTTTACCG AAATAGATAT ACGCATACCT
CAGTCGGAAA ACCCGGCAAC TGCATTCCAG GTACAGGCAA ACAACTATAA GGAACTTATG
AAAATTTGTC TGGCAAACCC CAATTGCAAT ACCTTTGTAA TGTGGGGATT CACAGATAAA
TACACATGGA TTCCGGGAAC TTTCCCAGGA TATGGCAATC CATTGATTTA TGACAGCAAT
TACAATCCGA AACCGGCATA CAATGCAATA AAGGAAGCTC TTATGGGCTA TTGA
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| Protein sequence | MSRKLFSVLL VGLMLMTSLL VTISSTSAAS LPTMPPSGYD QVRNGVPRGQ VVNISYFSTA
TNSTRPARVY LPPGYSKDKK YSVLYLLHGI GGSENDWFEG GGRANVIADN LIAEGKIKPL
IIVTPNTNAA GPGIADGYEN FTKDLLNSLI PYIESNYSVY TDREHRAIAG LSMGGGQSFN
IGLTNLDKFA YIGPISAAPN TYPNERLFPD GGKAAREKLK LLFIACGTND SLIGFGQRVH
EYCVANNINH VYWLIQGGGH DFNVWKPGLW NFLQMADEAG LTRDGNTPVP TPSPKPANTR
IEAEDYDGIN SSSIEIIGVP PEGGRGIGYI TSGDYLVYKS IDFGNGATSF KAKVANANTS
NIELRLNGPN GTLIGTLSVK STGDWNTYEE QTCSISKVTG INDLYLVFKG PVNIDWFTFG
VESSSTGLGD LNGDGNINSS DLQALKRHLL GISPLTGEAL LRADVNRSGK VDSTDYSVLK
RYILRIITEF PGQGDVQTPN PSVTPTQTPI PTISGNALRD YAEARGIKIG TCVNYPFYNN
SDPTYNSILQ REFSMVVCEN EMKFDALQPR QNVFDFSKGD QLLAFAERNG MQMRGHTLIW
HNQNPSWLTN GNWNRDSLLA VMKNHITTVM THYKGKIVEW DVANECMDDS GNGLRSSIWR
NVIGQDYLDY AFRYAREADP DALLFYNDYN IEDLGPKSNA VFNMIKSMKE RGVPIDGVGF
QCHFINGMSP EYLASIDQNI KRYAEIGVIV SFTEIDIRIP QSENPATAFQ VQANNYKELM
KICLANPNCN TFVMWGFTDK YTWIPGTFPG YGNPLIYDSN YNPKPAYNAI KEALMGY
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