Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1953 |
Symbol | |
ID | 4810736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 2326192 |
End bp | 2326896 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640107369 |
Product | cell wall hydrolase, SleB |
Protein accession | YP_001038364 |
Protein GI | 125974454 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
TIGRFAM ID | [TIGR02869] spore cortex-lytic enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGAAAAA GGGTATTATC AATCATTGTA ATAATAACAA TACTGTCAAT TTTAAGTTCA GCCATCGTTT TTTGGGAGGA AATATACAGT TTATACGGTT ACAGCAAGGC TGCACTGTCA TATTACGGCT CAACCGGGCA GGAAGTTAAA AACATTCAGT ACAAGCTTGC AATTTGGAAG TATTACAATG GCAAAATAGA CGGAATTTAC GGTTACAAGA CTTACATGGC GGTCCGCAAA TTCCAGGCCA AAAACGGCCT GAAGGTGGAC GGAATAGCGG GTCCGGAAAC ATTGGCGGCT TTGGGACTCC CTACCGGACA AGCTGCCAAA GCAACATCCG CCCAGCCGTC AAGCAACAGG AATCTGGATC TTCTTGCCCA CCTCGTTTAC GGCGAAGCGC GGGGAGAGCC TTATATCGGA CAAGTGGCAG TTGCAGCAGT TGTCATCAAC AGGACAAGGG ACAGCAGATT TCCCAACACA ATAGCCGGTG TTATTTATCA ACCCGGCGCA TTTGACGCTG TAAGCGACGG ACAGATAAAC CTTGCACCCA ATGAAACTGC GTACAAAGCT GCAAAAGACG CGTTAAACGG CTGGGACCCC ACTGGAGGAG CGTTGTATTA CTACAACCCC AGAACCGCCA CCAGCAAATG GATATGGTCA AGAAAAATCG TAAAGGTAAT CGGGAAACAC AATTTTGCAA TCTAA
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Protein sequence | MRKRVLSIIV IITILSILSS AIVFWEEIYS LYGYSKAALS YYGSTGQEVK NIQYKLAIWK YYNGKIDGIY GYKTYMAVRK FQAKNGLKVD GIAGPETLAA LGLPTGQAAK ATSAQPSSNR NLDLLAHLVY GEARGEPYIG QVAVAAVVIN RTRDSRFPNT IAGVIYQPGA FDAVSDGQIN LAPNETAYKA AKDALNGWDP TGGALYYYNP RTATSKWIWS RKIVKVIGKH NFAI
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