Gene Cthe_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1934 
Symbol 
ID4810792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2309381 
End bp2310058 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content37% 
IMG OID640107350 
Productabortive infection protein 
Protein accessionYP_001038345 
Protein GI125974435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0936214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGATT CTAAAAATAA AAAGTATATA ATCAAAGTTT TAATCCCATA TCTTATTGTA 
TTTTATTTCT TTTGGTCCGT GTATACCATA TTTCTCGAAC CGTTTATAGA AAAGGGTCCG 
TATCTTTTAA ATCTGCTCCT GGTAAACTTC GTAAAACTGT GCTTTTGGAC GGTACCCGCC 
CTGGTTGTTT TAAAATACGT TTTCAGGGAA AAACCCTTAA GTTATATAAA GCTCAGCAAA 
GACAAACTTC GCGGCTTTGC ATACGGTTCT TTGTACGGAG TTGTCATTGT CATATATATA 
AGCGTCACCA GATTTTTGTT CAGCGGTGAA TTCAACTTTA ATCCTTTTTT CGGTTTGGAG 
TCGTGGATAG GCGGAGTATT GCTTATCGGA TTTACCGAGG AAATTGTATT TCGCGGATTT 
TTACTGCAGA AATTTGAAGA AATTATGGAC AGCAAATACG CCAATTTGCT GACCGCTGTA 
CTGTTTCTTT TGATTCATTT CCCGAAGTGG TATATGCAGG GGAATTTGTT TGTGGCGGAA 
TTTATGGTGA ATTCAGTGTT GTTTATGCTC CTTTTCAGCG TCCTTATGGC GGTTCTTTTA 
AAGAAAACGA ACTCTTTGTG GACCTGTATA CTCATTCATT CCGCCAATAA CTTTGCAATG 
TTTGCATTGG GTGAATAA
 
Protein sequence
MVDSKNKKYI IKVLIPYLIV FYFFWSVYTI FLEPFIEKGP YLLNLLLVNF VKLCFWTVPA 
LVVLKYVFRE KPLSYIKLSK DKLRGFAYGS LYGVVIVIYI SVTRFLFSGE FNFNPFFGLE 
SWIGGVLLIG FTEEIVFRGF LLQKFEEIMD SKYANLLTAV LFLLIHFPKW YMQGNLFVAE 
FMVNSVLFML LFSVLMAVLL KKTNSLWTCI LIHSANNFAM FALGE