Gene Cthe_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1921 
Symbol 
ID4810779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2291601 
End bp2291945 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content39% 
IMG OID640107338 
ProductPadR family transcriptional regulator 
Protein accessionYP_001038333 
Protein GI125974423 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTAGCA GTGATGTAAT ACGGGGTTAT GTCGATACCA TTATCCTAAG CCTCCTTATA 
GAAGGTGATT CCTATGGGTA CGAAATTTCA AAGAACATCC GCATAAAAAC AGACGAACTG
TACGTTATAA AAGAAACAAC GCTTTATTCC GCCTTCGCAC GTCTCGAAAA AAACGGATAT
ATCAAATCCT ACTATGGGGA AGAAACTCAG GGCAAAAGAA GAACTTACTA CCGGATAACT
CCCGAGGGAA TCAAATACTA CAAACAAAAG TGCGAAGAAT GGGAACTGAC CAAAAAGGTA
ATTAATAAAT TCGTAAAGGA GTTGGAAAGC AATGGAGACA ATTAA
 
Protein sequence
MISSDVIRGY VDTIILSLLI EGDSYGYEIS KNIRIKTDEL YVIKETTLYS AFARLEKNGY 
IKSYYGEETQ GKRRTYYRIT PEGIKYYKQK CEEWELTKKV INKFVKELES NGDN