Gene Cthe_1875 details

Gene Information

• Locus tag: Cthe_1875
• ID: 4809206
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: -
• Start bp: 2226953
• End bp: 2227729
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640107294
• Product: HMG-I and HMG-Y, DNA-binding
• Protein accession: YP_001038289
• Protein GI: 125974379

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTGGCGG TTAATGTTCT AATTGAGTGG ATAGGAACCA AGGAACAGGG AGTAAGCGTA 
ATAGAACGGA TTCTATGGTT AGATGAGATA AGTGATTTAA CTTATGTCAT TGATGTAAAT 
GCCAATAAAC TTCCTTATGC AAGGACAATA AGCGAGTACA AAGTAGCCTT GGATACAGAG 
GAAGCAATAA TGCTTGATAA AGACCCGTTT TCAAGAGTTG TTGATGAGGT ATTACTGTCA 
GAGAAGGCTA AAGCCATAAG GGACAGAGCG TGGGAGGCTA TATCAAGTAT AGTTATTTTA 
GAACCTGAAA TTTATTATCC AAGGGAAAGG GCTAAACATG TAAAAACAGT TGCACAAAAA 
TACGGACTTT CAGAGAAAGT AATTTATAAA TATCTGAAAC GGTATTGGAT AAGAGGCAAG 
ATAGTAAATG CCCTACTGCC TGACTATGAC AGGTGTGGCG GTAGAGGTAA AGAAAGGAAT 
ACCAAAGGCG TAAAACTTGG GCGACCAAGA AAGCATGCGA ATATTATCGG CGCTGGTATT 
AGTGTTGACG AAGAAATAAA GCGCATATTC AGAATTGCAA TAAACAGGTT TTACTATAGT 
TCTGCCAAGC ATTCCTTGAC TATGACTTAT GAACTGATGC TAAAGGAGTA TTTTAACGAT 
GGCCATAGGA CGGTTGACGG AAAGAAAATA CCCATTCTGA AACCTTCCTC TGAAGTCCCT 
ACTTTTGGAC AGTTCCGTTA CTTTTTTGGA GATTGTAAAA TATTTTATGT AAACTAA 

 

Protein sequence

MLAVNVLIEW IGTKEQGVSV IERILWLDEI SDLTYVIDVN ANKLPYARTI SEYKVALDTE 
EAIMLDKDPF SRVVDEVLLS EKAKAIRDRA WEAISSIVIL EPEIYYPRER AKHVKTVAQK 
YGLSEKVIYK YLKRYWIRGK IVNALLPDYD RCGGRGKERN TKGVKLGRPR KHANIIGAGI 
SVDEEIKRIF RIAINRFYYS SAKHSLTMTY ELMLKEYFND GHRTVDGKKI PILKPSSEVP 
TFGQFRYFFG DCKIFYVN