| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1871 |
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| Symbol | |
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| ID | 4809202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2220405 |
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| End bp | 2222282 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640107290 |
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| Product | Tn7-like transposition protein D |
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| Protein accession | YP_001038285 |
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| Protein GI | 125974375 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCATT TTTTCCCAAC CCCATATCCT GATGAAATCC TTTATAGTGT ATTGGCACGC
TATAGTGTCC GCTGTGGGAT TACAAGTTAT CAAACTATCA TGGAGAGCAT ATTTGGAAAG
TGTAGTTCCA GGGCTGTAAT GGAAATGCCT TTTAATTTGA ATTCGCTGGT ATCTAACCTA
CCTGTGAATT GTCCTTATAC TGCTGATGAT TTGATTTATA ATCATACTCT GTACCCATTC
TTTACTGCAT TTCTTCCAAA AGAACGGGCA GAAGAAGTAA AACAATTAAT GCTGTCTGAA
GGTGGAAGCA AAATTTATGG TAAAGCAGGT ATTATCGGCA GTAGGATTCC ACTAAACCAA
TATTTAAGAT TTTGTCCCAA ATGCTTCGAA GAAGAGCAGA AATTGTATGG TGAAGGATAT
TGGCACAGGT TGCATCAGAT ACCCTTTGTA ATGGTGTGTC CTATACATAA AGCGATTCTT
CATAATAGTA CTGTTTTAGT GCGGGGTCAT AATCCACAAG CCTATGTACC TGCTGACGCT
GATAACTGCA TTAATAATGA ATTACTTTAT TTCAAACCTG AAACGATAGA GAAGTTTGTA
CTCATTGCCC AAGATGCAAA AGTATTGCTT GAAAACCAGT ATCCCAATAA GCAGTTTAAA
TGGTTTGCTA AACAGTATTT AGAAAGGTTT AAGGAATTAG GGTATGCCAA TATTAATGGT
AAAGTGTATT GGGAAGAAGT AATAAAGGAC TTCATAGATT TCTACGGATT GGAGTTCCTA
AATGCTGTTT GTTCTAATAT AGAAGACAAG GAACAGGGAA GATGGCTGAA AGAAATTACA
CATAGTGATG CAAAGTCGGT GTATCCAATT CGGCACCTGA TGCTGGCAAG ATTTTTAGGA
ATAGGAGTAG AAGAACTTTT TATAAAAGAG TTAAATTACA GACCTTTCGG AGAAGGGCCT
TGGGTATGTC TTAATCCTGC TGCTGACCAC TTTCTTGAAC CTGTAATAAA AGACGTAGAA
ATAAAGTATA GGCGTAGAAA TAAGAACACT AATGGTTTTT TCAGATGTCC CTGCGGATAT
GAATATATGG AAACAGTTAC AAGAGAACAA GGAGAAAGGG GTAAGGGGCG GCGCAGATTT
GTCAGGGTTG TAGAGTATGG ACATGTATGG AAGGCTAAGG CTCATGAATT GCATGAAAGT
GGAGTAAGTA TTCAGGAAAT TGCAGTAAGA CTTAATGCAG ATATTAGTAC TGTAAGAAAG
TATATTTCTG AAAAAGGACA GGAAAAAAGC AAAAAGTTAG TAGAACGTAA TAGTGTTGCT
TCTGCGGAGT TTGAAGTAAA AAGACAGTAT CACAGGGAAA AGTGGCTTCA GATAGTCAGG
GAAAATCCAG ACAAGGGCAG ACTTGAATTA CGGAGGCTGG GTAAATATAC CTGTACCTGG
TTATGCAGGA ATGACAGGGA GTGGTGGGAG AAAAACACCC CTGCAAAGAA ATACGTTCAG
GCTTACAGTA ATGTTGATTG GGAAACTAGG GACAAGGAAA TCTTACAGCA TGTTAAGCAA
ACTGTTCAGG AGATTTTAGA AAGTGATGAA AAACCTCAAC GAATTAGCCT GCGGTTGATT
AAAACTAAGT CAGGACTTAA AAGTTTTGAC CTTCAATTGG ATAAATTACC GTTGACTAAA
TCATTCATCA ATTCTGTTAT AGAGAACCCT ATGGATTTGC ACAAAAGGCG TATACAATGG
GCTATTGAAA AACTTAATAA AGAAGGAAAA GCATTAACTA TTTCTAATAT TACTGTCATG
ACAGGTGTTG GTAATAAATA TAGGAAACTA GTTATAGAGG AGATTAAAAA GGCGTTAGAA
GAGTTAGGTG AGAGGTAG
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| Protein sequence | MMHFFPTPYP DEILYSVLAR YSVRCGITSY QTIMESIFGK CSSRAVMEMP FNLNSLVSNL
PVNCPYTADD LIYNHTLYPF FTAFLPKERA EEVKQLMLSE GGSKIYGKAG IIGSRIPLNQ
YLRFCPKCFE EEQKLYGEGY WHRLHQIPFV MVCPIHKAIL HNSTVLVRGH NPQAYVPADA
DNCINNELLY FKPETIEKFV LIAQDAKVLL ENQYPNKQFK WFAKQYLERF KELGYANING
KVYWEEVIKD FIDFYGLEFL NAVCSNIEDK EQGRWLKEIT HSDAKSVYPI RHLMLARFLG
IGVEELFIKE LNYRPFGEGP WVCLNPAADH FLEPVIKDVE IKYRRRNKNT NGFFRCPCGY
EYMETVTREQ GERGKGRRRF VRVVEYGHVW KAKAHELHES GVSIQEIAVR LNADISTVRK
YISEKGQEKS KKLVERNSVA SAEFEVKRQY HREKWLQIVR ENPDKGRLEL RRLGKYTCTW
LCRNDREWWE KNTPAKKYVQ AYSNVDWETR DKEILQHVKQ TVQEILESDE KPQRISLRLI
KTKSGLKSFD LQLDKLPLTK SFINSVIENP MDLHKRRIQW AIEKLNKEGK ALTISNITVM
TGVGNKYRKL VIEEIKKALE ELGER
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