| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1861 |
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| Symbol | |
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| ID | 4809412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2205977 |
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| End bp | 2207062 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640107280 |
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| Product | CdaR family transcriptional regulator |
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| Protein accession | YP_001038275 |
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| Protein GI | 125974365 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0198483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGTAA AGATATATCA GAATCTTGTA AATCAAATAA AGGACGTAAT AGATTCGGAG
TTTGGGATAA TGGATGACAC AGGTCTTATT TTGGCCTGCT CAGATGAAAA GAAAGTGGGA
CAGAGCAGTT CACTGGTATC TGAGATAATG AGGTCCAAAG ATCAGTTTGT GGTGATTGAC
GGACAAACGT TTCAGAAGGT ATACATAAAG AACAAACTTG AATTTATTAC GTTTATTGAT
TCGGATTCTG AAAACAGCCA AAAATTTCTT GCGTTGATAT CGATTAATAC CATTAACGTA
AAGAATTATT TTGACGAGAA ATATGATAAG ATCAGTTTTA TAAAAGGAAT TATAATGGAT
AATATTCTTC CAGGAGATAT CACTTTGAGG GCAAAGGAGT TGCACCTTCA AAATAATGTA
AACAGAGTGG TTTTTCTTGT GGAAACCGAA AAGGCAAAAG ATATTTATGC CCACGAGATA
ATTGAAGGGC TTTTTCCGGT TAAAAACAAA GACTTTGTTG TAGTGCTTGA CGATGAGAAA
GTTGTGCTTA TAAAAGAGTT GAAGCCGGAC TATGACTACA AGGAGATAAA CAAAATTTCC
AAAGTTATTA TTGATACTTT GTCCACGGAG GGAATGATTA AAGCCAGGGT TGGAATCGGC
ACGGTTGTTG ACAATATAAA GGATATAGGA CGTTCTTTCA AAGAAGCACA GATGGCGCTG
CTTATAGGAG GCATTTTTGA CAGCGAAAAG AGTATTGTGG ATTACAACAG ACTTGGGATA
GGAAGGCTCA TATATCAGCT TCCTCCGACA TTGTGCAAGC TGTTTTTAAA AGAGGTGTTC
AAGGAAGGCT CCTTTGAAGC TTTGGATTCC GAGACGATGT ATACGATTAA CAAATTTTTT
GAAAACAATC TTAATGTAAG TGAAACTTCA AGGCAGCTTT ATGTTCATCG AAACACCCTT
GTGTACAGAC TGGATAAGAT TCAAAAAATT ACAGGCCTTG ACCTTAGATT GTTTGACGAT
GCAATAATAT TCAAAGTTGC CATGCTGGTA AAAAAATATC TTGACAGTAA TCAAGCCCTT
GTATAG
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| Protein sequence | MSVKIYQNLV NQIKDVIDSE FGIMDDTGLI LACSDEKKVG QSSSLVSEIM RSKDQFVVID
GQTFQKVYIK NKLEFITFID SDSENSQKFL ALISINTINV KNYFDEKYDK ISFIKGIIMD
NILPGDITLR AKELHLQNNV NRVVFLVETE KAKDIYAHEI IEGLFPVKNK DFVVVLDDEK
VVLIKELKPD YDYKEINKIS KVIIDTLSTE GMIKARVGIG TVVDNIKDIG RSFKEAQMAL
LIGGIFDSEK SIVDYNRLGI GRLIYQLPPT LCKLFLKEVF KEGSFEALDS ETMYTINKFF
ENNLNVSETS RQLYVHRNTL VYRLDKIQKI TGLDLRLFDD AIIFKVAMLV KKYLDSNQAL
V
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