Gene Cthe_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1772 
Symbol 
ID4810017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2093222 
End bp2094010 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content41% 
IMG OID640107186 
Producthypothetical protein 
Protein accessionYP_001038186 
Protein GI125974276 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.442971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA AGGTTGTAAA GATTTTTGAT GTTTTAATGC TCATCATAGG GGTCTTGGGA 
ATATTGGATT TTTTGATGTT AATGGCTATT GGCACGGTAA TTAATTTTGG AATTTTGTTT
CCGCTTGTTG CGGGAATAGT TCTTACCTTT GTGGCGTCAG TGAGGCTTTC AGGCAAAGGA
GATATGCTTC GGATCAAAAA TACGATTTTA AGGAGGCTGT TTTTTGGCGC CTTAATTGCT
TTTGCAGGCT CCTTTGTATT GATACTGGGC TTGATTTTCG CATCATCTGA CACCGACAAA
AATGTGGAGG TCGATTATCT GGTTATTCTG GGAGCCGGAT TAAAAGGCGA CCGGATAACT
CCCACTTTTC AATACCGGCT GGACAAGGGT GTGGAATATC TTAGGGCCAA CCCTGAGTTA
AAGGTGGTTG TGACAGGTGG ACAGGGTCCC GGTGAGGATT TAACTGAGGC TGAGGCAATG
AAAAGATACC TGGTAAGCCA CGGAATTGAC GAAGACAGAA TTATTATGGA AGACAGGGCA
ACCAGCACAA ATGAAAACAT GAAATATACC GCGGAAGTTT TAAAACAGCT TACAGGAAGA
AGCGACTACA GAATAATGAT TGTCACCAAT GACTTCCATA TGTTCAGGGC AAAAATTCTT
GCACGGCATA ACGGTTTTAC GCCCTATGGA ATTACTGCGC CGACAAATCC CGTTGTACTT
GTTAATTCAT ATATAAGAGA ATATTTTGCC GTGGTGAAAT CAATAGTATT TGACATAATA
CTGGATTAG
 
Protein sequence
MKQKVVKIFD VLMLIIGVLG ILDFLMLMAI GTVINFGILF PLVAGIVLTF VASVRLSGKG 
DMLRIKNTIL RRLFFGALIA FAGSFVLILG LIFASSDTDK NVEVDYLVIL GAGLKGDRIT
PTFQYRLDKG VEYLRANPEL KVVVTGGQGP GEDLTEAEAM KRYLVSHGID EDRIIMEDRA
TSTNENMKYT AEVLKQLTGR SDYRIMIVTN DFHMFRAKIL ARHNGFTPYG ITAPTNPVVL
VNSYIREYFA VVKSIVFDII LD