Gene Cthe_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1771 
Symbol 
ID4810015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp2092364 
End bp2092918 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content44% 
IMG OID640107184 
Productrubrerythrin 
Protein accessionYP_001038185 
Protein GI125974275 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0654519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAA AAAACGCAAT GACCGCTGAT TTCTTAAGAT CCGCATACGG CGGTGAAAGT 
ATGGCTCACA TGAGATATCT TCATTGGGGA GACCTTGCGG AAAAGGATGG TTTTCCAAAC 
ATAGCAAAAC TGTTTAGAGC CATAGCTTAT GCCGAACAAG TTCATGCAGG CAATCACTTC 
AATGAATTGA AAGACCAAAA AGGAGATTAT ACAGTAACAG CCGGAGCGGT TTTTGGCATC 
GGAACCGTGG TTGAAAACCT TCAGGGAGCT ATAAACGGTG AGCTTCATGA AGTTGAGCAA 
ATGTATCCCG TATATCTGGA AGCGGCAAAA TTCCAGGATG AAAAAGGAGC TCAGCGCAGT 
TTCCACTTTG CACTGGAAGC TGAAAAGATT CACGCTCAAT TGTTCTCGGA CGCACAAAAA 
GCGGCAAAAG AGGGAAAAGA CATGCAGCTT GAAGCAGTAT ACATCTGCCC TGTTTGCGGA 
CATACAGTCC TTGACAATGC TCCGGACAAA TGCCCTGTTT GCGGCGCAAA AAAAGAAATG 
TATAAAAAAT TCTAA
 
Protein sequence
MAVKNAMTAD FLRSAYGGES MAHMRYLHWG DLAEKDGFPN IAKLFRAIAY AEQVHAGNHF 
NELKDQKGDY TVTAGAVFGI GTVVENLQGA INGELHEVEQ MYPVYLEAAK FQDEKGAQRS 
FHFALEAEKI HAQLFSDAQK AAKEGKDMQL EAVYICPVCG HTVLDNAPDK CPVCGAKKEM 
YKKF