Gene Cthe_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1763 
Symbol 
ID4810007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2085057 
End bp2085797 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content45% 
IMG OID640107176 
ProductABC transporter related protein 
Protein accessionYP_001038177 
Protein GI125974267 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.261961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATCG AAGTTAAAGA TGTGAACAAG GTATACAAAA ACGGAAAGAT TGAAGTCAGA 
GCGCTGAATA AAGTTAATCT CTCTGTGGAG CGGGGGGAAT TTGTGTCAAT TATGGGTCCC
TCGGGCTCCG GCAAGTCAAC CCTTATGAAT ATCCTGGGGT GTCTTGACAG GGCAACATCA
GGCAAATACA TACTTGACGG AATGGACGTA TCCAATCTTA ATGACGTGGA GCTTGCCAGG
ATCAGAAATT TAAAGATAGG CTTTGTATTT CAGTCATTCA ATCTTCTTCC GAGAATGACC
GCTCTTCGAA ATGTTGAACT TCCGATGATA TACGCCAAAG TTAACGCAAA GGAAAGAAAA
AGAAGAGCGG AAATGGCATT GGAAAGAGTG GGGCTAAAAG ACAGAATGAA CCACAAACCC
AACGAGATGT CAGGAGGTCA AAAACAGAGG GTGGCCATAG CAAGGGCGCT GGTGAACGAT
CCTGCGATTA TTCTGGCGGA TGAGCCCACA GGAAACCTTG ACAGCTACTC GGGAGAAGAA
ATCATGGACC TGTTTCAGGA GTTGAACCGG GAGGGGGTTA CAATAATCCT GGTTACCCAT
GAGCCGGATA TTGCACAGCA TACAAAGCGG ATTGTAACCT TCAGGGATGG ACATTTGAAA
AGCGATGTGA CAGTGCAAAA GCCTCTTGAT GCAAAAGAGG TCATGAGAAG ATTACGTATG
GAAATGGAGG CGGCGACATG A
 
Protein sequence
MIIEVKDVNK VYKNGKIEVR ALNKVNLSVE RGEFVSIMGP SGSGKSTLMN ILGCLDRATS 
GKYILDGMDV SNLNDVELAR IRNLKIGFVF QSFNLLPRMT ALRNVELPMI YAKVNAKERK
RRAEMALERV GLKDRMNHKP NEMSGGQKQR VAIARALVND PAIILADEPT GNLDSYSGEE
IMDLFQELNR EGVTIILVTH EPDIAQHTKR IVTFRDGHLK SDVTVQKPLD AKEVMRRLRM
EMEAAT