Gene Cthe_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1717 
Symbol 
ID4808892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2038632 
End bp2039204 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content32% 
IMG OID640107130 
Producthypothetical protein 
Protein accessionYP_001038131 
Protein GI125974221 
COG category 
COG ID 
TIGRFAM ID[TIGR02215] phage conserved hypothetical protein, phiE125 gp8 family 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCA AAATAATAAA TCCACCAATA GTTGAACCCA TAACTTTAGA AGAAGCAAAA 
CAGCATTTAA GAGTAGATGG TAATGATGAT GATTTGCTAA TACAAAGTCT TATAAAGCAG
GCAAGGGAAT GGTGTGAAAA CTTTCAAAAT AGAAAATATA TAACTCAGAC ATTAGAGTTT
GTTTTGGATA CTTTCCCTAA TGGTAATGCT ATAGTTTTTG ATAGCTGCTC ACCGATACAA
AAGGTGGAAA GTATAAAATA TTATGATGAG AATAGACAGG AGTATTTATT TGATGAAAGT
AATTATATTT TTGATTTAGA TGGCTTTGTA AATAGAGTTG TTTTAAATAG AGGAAAGCAT
TGGCCTACAG TAGAACTTCA GTCAGTAAAT GCAGTAAGAG TAAGATTAAT TGCAGGCTAT
GGAGATAGTG GAGATAAAGT GCCTGAAGCA ATAAAGTGGG CAATGATACT TCAAATGAAG
CTTTTATATG ATGATTACAG ACCAGAGGAA AAAACAAAGT TAGAGGAAGC AAGAAATGCT
CTTCTTTCTA TGAACAGGGT GATTCCAATA TGA
 
Protein sequence
MAIKIINPPI VEPITLEEAK QHLRVDGNDD DLLIQSLIKQ AREWCENFQN RKYITQTLEF 
VLDTFPNGNA IVFDSCSPIQ KVESIKYYDE NRQEYLFDES NYIFDLDGFV NRVVLNRGKH
WPTVELQSVN AVRVRLIAGY GDSGDKVPEA IKWAMILQMK LLYDDYRPEE KTKLEEARNA
LLSMNRVIPI