Gene Cthe_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1696 
Symbol 
ID4808871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2020110 
End bp2020709 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content26% 
IMG OID640107110 
Producthypothetical protein 
Protein accessionYP_001038111 
Protein GI125974201 
COG category[S] Function unknown 
COG ID[COG5658] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000273013 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGGATA AAAATAAGAA TAGAGGGATA CTATTTATTA TTTTAGCAAA TATTGTATTT 
GCAGTTTCTT ACTATATTGC TAATAAAAAT AGTTCAACAA GTAATCTATA TGCCACACTA 
ATAATTGCAG TTAGTATTCT GATTCAGTAT GTAATTTTTA GGACGTATGC AGGCAAGGCG 
AAAGATATGG CTGCTATTGA AAAATACTAT TATAAAGTGT TAATAAGTTC TACAATCGTA 
TTAATGACTA TACAATTTGT ATTACTTTAT AGTTACTTTA ATGCGAAAAT AGATTCTTAT 
AAAATTGTTT CGATAATAAT TTCGTATATG CTAATTTATA TTGGTAATAT AATGCCGCAA 
ATCAAACAGA ATTTTATAAT TGGAGTAAGA ACAAAAAAAG CATTAAGTAA CGAGAAGGTG 
TGGAGAAAGG CTAATACAAT TGGAGGAATT AGTTTAGTAA TTGTTGGAAC AATATTATTC 
ATAATTTGTT TATTTATGAG AGGCAAATAT TTGATCGTGC TATTATTAGT AGGAGTAGTA 
TTATGGTCAA TAATTAATGA TTTTTATATT AGTGTTTATT GTAAAAAGAA TAAGATTTGA
 
Protein sequence
MLDKNKNRGI LFIILANIVF AVSYYIANKN SSTSNLYATL IIAVSILIQY VIFRTYAGKA 
KDMAAIEKYY YKVLISSTIV LMTIQFVLLY SYFNAKIDSY KIVSIIISYM LIYIGNIMPQ 
IKQNFIIGVR TKKALSNEKV WRKANTIGGI SLVIVGTILF IICLFMRGKY LIVLLLVGVV 
LWSIINDFYI SVYCKKNKI