Gene Cthe_1677 details

Gene Information

• Locus tag: Cthe_1677
• ID: 4808927
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: -
• Start bp: 2002397
• End bp: 2003083
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640107092
• Product: abortive infection protein
• Protein accession: YP_001038093
• Protein GI: 125974183

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAC ACACAGAGAT AATTAAGTCA AATGTGAAAT CGTCAATGAT ACAGCTTGTT 
ATAGCTGTTT GCGGTGTATT TGTTGCCGTG TTTGGTCTGT CGATGTTTAA TCAATATTTA 
CTGATGTCAT TCCCTTTGCC ATTGCGTATG GTTCTTATGA TTGTCACGCA ATGGTTGCTT 
TTCCTCGTTC CAGCGATATT AATGATTGTG AACAAAGAAA AGCTCAGCAG TATCGGCTTC 
AAAAAAGAAA AAATTCTGCC GCAAATAGGC ATCGGTGTAT TACTTGCTTT AGCTATGTCA 
TTAGTTTTGA CTGTTCTCCC CATCATACTT GGCTTTAAAG ATATGGTTGG AAACACAACT 
TACACGCAGA CATATCAATT CGTTTATCAA TTTATCTATG CAATATTGGG AGTTGCTCTT 
GCTGAGGAAT TGGTCTTTCG CGGTTACATA TTCCACAAAT TATTGGCAAT CAAAAACTCT 
AAGTGGTTTG CTATCATTAT ATCATCTTTG CTGTTTGGGT TGTTTCATAT ATTCAACGGA 
AATATTATTC AGATTTTTAT GACGGCATTT ATTGGATTTC TCTACTGTAT ATTTAGAGAG 
AAAATTAAAG GTTGTACCCT GCTTTCGCTG ATTATTGCCC ATGGGGTGTA CGATGCCATG 
ATTGTATTAT GGGTTTCCAT ATTATGA 

 

Protein sequence

MEKHTEIIKS NVKSSMIQLV IAVCGVFVAV FGLSMFNQYL LMSFPLPLRM VLMIVTQWLL 
FLVPAILMIV NKEKLSSIGF KKEKILPQIG IGVLLALAMS LVLTVLPIIL GFKDMVGNTT 
YTQTYQFVYQ FIYAILGVAL AEELVFRGYI FHKLLAIKNS KWFAIIISSL LFGLFHIFNG 
NIIQIFMTAF IGFLYCIFRE KIKGCTLLSL IIAHGVYDAM IVLWVSIL