Gene Cthe_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1667 
Symbol 
ID4808917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1993828 
End bp1994544 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content43% 
IMG OID640107082 
ProductABC-2 type transporter 
Protein accessionYP_001038083 
Protein GI125974173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0141124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACTA TATTTCGAAT TTTTCTTAAA AATGCAGTGC GTGATGTCTA TCTGCTTTTT 
TGGTCTATTC TTTTGCCCTT GGGCATGTTA ATTGGCCTGG GTTTATATTT CAACACGCCG 
GAATACCATG TTCGCCTGCT CGCCGGTGTG ATTGGCACCA GTGCCCTTTT TTGGGCATTG 
GAAACCACTG TATTTTATAT TTTGAAGCAA AGAAACAGGG GCGTTTACAA GTTGTTAAGA 
GTTACTCCCA TGAAAATTTT TTCGTTTATT ATTGCCTTGA CCTTAGCATG GACGGTAGTA 
TCTCTGGCCG TAGCTACCAT CCTGCTTATT GGGGGGCTGG TGCTATTCGG CATCAGGATG 
CAGTTTGGGA CTTTGCTGAT CTTTTATGTA ACGCTGGTGA CTGCAACCAT ATGCTTTACT 
TTAATAAGCT TTGTAGTGGC TAATATAAGC AAAAATGAAG GGCAAGCCAG TATATATTCC 
AATATTTTCG CAATGCCGAT GCTGTTTTTG AGCAGTGCTT TTTATAGTCT GGACACAGCA 
CCTACCTGGA TTAAGACGCT AAGCCGGCTC AACCCTTTTT CCCATTTTGT AAGTGGGCTT 
CATAGTACGA TAGTTTTCGA TTTACGGGGA GCGGCGGCGA ATTTGTTTAT CCTGCTTGCT 
TTCGGCGTTC TTGCGCTGAT AGCTGCAATC CTGACTTTTC GCTGGGATTC GGACTGA
 
Protein sequence
MMTIFRIFLK NAVRDVYLLF WSILLPLGML IGLGLYFNTP EYHVRLLAGV IGTSALFWAL 
ETTVFYILKQ RNRGVYKLLR VTPMKIFSFI IALTLAWTVV SLAVATILLI GGLVLFGIRM 
QFGTLLIFYV TLVTATICFT LISFVVANIS KNEGQASIYS NIFAMPMLFL SSAFYSLDTA 
PTWIKTLSRL NPFSHFVSGL HSTIVFDLRG AAANLFILLA FGVLALIAAI LTFRWDSD