Gene Cthe_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1659 
Symbol 
ID4808909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp1985656 
End bp1986309 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content36% 
IMG OID640107074 
ProductTrkA-N 
Protein accessionYP_001038075 
Protein GI125974165 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0583689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAT TTTTAGTTAT TGGAATTGGA CGTTTTGGGA AACATTTGAG CCGTAAGCTG 
GTTGAGCTTG GAAATGAAGT CATGATTGTT GATAAAAATG AAGAAAATAT AAGAGAACTT 
TTACCCATCG TGACAAATGC ACAAATTGGT GATTGTACGA AAGAAGAAGT ACTTCGTTCA 
CTGGGCATTG ATAATTATGA CGTATGTTTT GTCTGTGTTG AAAATGATTT TCAGAGCAGC 
CTTGAAATTA CCAATCTGCT TAAGGATTTT GGCGCTAAAT ATGTAATAAG CAAATCCAGT 
CGCGATATCC AAACAAAATT CTTACTACGT AATGGTGCCG ATGAAGTTAT AGATCCTGAA 
CGGAATATTG CTGAAAAACT GGCGGTGCGC TGCAGTGCAA ACCACGTTTT TGATTATATT 
GAGCTCACAA ATGATATCTC CATCTATGAA ATTCCGCCTG CAAAAAGCTG GATTGGGAGA 
AGTATAAAGG AGATAAATTT CAGAGTAAGA TACCATGTAA GTATACTGGC AACAAAAGCT 
GGGAATGATA TTTCACCTTT ACCTGTTGCC GATTATATAT TCAAGCCCGA GGAACATCTT 
TTAGTTATAG GACGCCGCAA GGATGTAGAA AAGCTATTAA AACATATAAA CTAA
 
Protein sequence
MKSFLVIGIG RFGKHLSRKL VELGNEVMIV DKNEENIREL LPIVTNAQIG DCTKEEVLRS 
LGIDNYDVCF VCVENDFQSS LEITNLLKDF GAKYVISKSS RDIQTKFLLR NGADEVIDPE 
RNIAEKLAVR CSANHVFDYI ELTNDISIYE IPPAKSWIGR SIKEINFRVR YHVSILATKA 
GNDISPLPVA DYIFKPEEHL LVIGRRKDVE KLLKHIN