Gene Cthe_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1643 
Symbol 
ID4809338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1968659 
End bp1969657 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content38% 
IMG OID640107058 
Productphage-associated protein-like protein 
Protein accessionYP_001038059 
Protein GI125974149 
COG category[S] Function unknown 
COG ID[COG3600] Uncharacterized phage-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGGA ATAAGACATT TTGCGAGGAA TGCAGAAGAG ATGTCGAATA CATGGTAGAA 
ACAGCAACAA TTAAGGGTAA ACTTAAAGGC GAAGAATATG AGTATACTGG AAAGAAGGCT
ATTTGTACGG AATGTGGGAG CGAAGTCTAT GTAGCGGATA TAGAGGACGA AAATCTAAAG
GCTTTGTATG ACACGTACCG TCAAAAAAAC GGCATTATTT CGCTGGAGAA GATATTAGAA
ATACCTCAGA AATACAATAT TGGCAAACGT CCGCTATCAT TGCTTTTAGG TTGGGGGGAA
ATGACTTTTT CGAGATATTG TGAAGGTGAT ATGCCTACAA AACAGTATTC AGATATTCTT
CAAAAGATTT ATGATGATCC AGCGTATTAT AAAGAATTAC TGGAGAAAAA TAAGGACAAT
TTAAAATCTC TGCAGGCATA TGAAAAAAGT AAGCGGAAGG TACAGGAACT GCTTGGGGAA
GAAAACAAAA CGGGTTCGAA GCTGGACTCA ATTATCCAAT ATCTGCTTTA TAAGTGCGAG
GACATAACTC CTTTAGCTTT ACAAAAGGCA CTATATTATG TCCAGGGCTT TTATTACGCT
TTTGAAGGAC GGTTTCTTTT TGAAGAAGAC TGTGAGGCAT GGGTTCATGG ACCGGTTTAC
AGAGATGTAT ATAACAGGTA TTCATCTTAT CGGTTTGACC CAATTGAGAG CGTTGAAGCT
TTCGATGAAT CAGTTTTTAC AACTGCTGAA AAAGCAATAT TGGATAGCGT TATTAAGAAC
TTCTGCTGCT ATAGTGGAAA AATACTAGAA AAGTTTACGC ATCTGGAGAA ACCATGGCGG
TATACCAGAG ACGGTTTGCC GGTGGATGCG CATTCTAATC GTGTAATACC CAAAGAATTG
ATCGGGGAAT ATTTTGTCGC TGTGAAAGAA AAATTCAACA TGCTCACTCC TGGAGATATA
GAAGTATACT CGAAAGCTAT CTTTGAACAA ATAAACTGA
 
Protein sequence
MNRNKTFCEE CRRDVEYMVE TATIKGKLKG EEYEYTGKKA ICTECGSEVY VADIEDENLK 
ALYDTYRQKN GIISLEKILE IPQKYNIGKR PLSLLLGWGE MTFSRYCEGD MPTKQYSDIL
QKIYDDPAYY KELLEKNKDN LKSLQAYEKS KRKVQELLGE ENKTGSKLDS IIQYLLYKCE
DITPLALQKA LYYVQGFYYA FEGRFLFEED CEAWVHGPVY RDVYNRYSSY RFDPIESVEA
FDESVFTTAE KAILDSVIKN FCCYSGKILE KFTHLEKPWR YTRDGLPVDA HSNRVIPKEL
IGEYFVAVKE KFNMLTPGDI EVYSKAIFEQ IN