| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1613 |
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| Symbol | |
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| ID | 4809308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1942344 |
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| End bp | 1944767 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640107029 |
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| Product | glycosyl hydrolase-like protein |
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| Protein accession | YP_001038030 |
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| Protein GI | 125974120 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3858] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.5027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAATG CCCGAATGTA TGAAGCACTT AGAGACTACG GCGACCGCTT TGATACGGTA
GGCATTTTTA CTTTTGAGGT TGACGAAACA GGCACAATCA CTGAAACCGG TACCAGCATC
AGCAGCATGC TTCCGTATAT TCAGAAATGG CCGCACATTA AGTGGCTGCT CACTATTATG
AATCATGGAA TAGCCAATAT TTTTACTGCA CTTCGCAACA ACGAAAACGG TGCAAAGGAT
AAGTTTCTCA CTGAAATCAT CCGAATAATG AACAAGTATC CATGGTGCGC TGGGGTAGAT
ATTGACCTGG AGCGCGGCGG CGGTTATGAA AACAAGGATG CGGCGAATGC ACTATTTAGG
GATATATACA ATACAGTTAA GTCTTATGAT GCAACAAAGC TTGTCAACAT CTGCCTGCCG
GGTATGATCG GTGTTCAAGG CTCGGTGGGC GGTGAAAACT GGTGTGTTTA TGCCGATCTT
AACGACTATT GCGATACCGC CGCCATCATG AGCTACGGCA TGGCATGGGC GGGTTCTGCT
CCCGGTCCGG TATCTCCCCG TGACTGGCTT GAGGGCATAT ATGATTATGC TGTTTCCGTT
ATGTCGCCGG ACAAGATATT CATGGGTTTG CCTGCTTATG GCTGGAACTG GAGGATCCAT
GATACGCCTG AAAACCTCGG AATAACCTAT CGAGGAGTGT CTAATACCTA CTATGCGGCT
AAATACTGGA TGACTGGGGT TTACAATTTC ACAGGTGATG CACCGCCCCA GCCGTTTATT
CCAATTGTGG CTTACTGGGA TGACTATAAC AAAGTACCTT GGGCTCTTCC TCATGTATAT
GACTATATGG AAGGATGGGA TGCTGTATCC TGGGAATATC CGCTGCTAAA AGGGGTTTAC
AACAGGCGAA GATATTTGAC AAGCTATGGC AAGGAGCAGA AAGCGGAGTT CGGAACCATT
TATATTGACA GGAACGGAGT TCCGGATGAA TACGAAGGAA ATGTCATTAT TACTGATGAG
ATGACCTCAC TGGGAGATGC CCAGGCGTCA GCAGAGTACC GTTTTGAGAT AAGAGAAGCG
GGATATTACG ATATTGCAGT ACAGCTTTGC TTTCCTTACT GGGACAAAAA TGCGATTATT
GTTTCCCTTG ATGGTATATC AAAGACTTTC AGCGAGAACC GTTTATGGTG GCCATACTGG
AGAAGAGTTT GCTGGTTGAC ACTTGCAAAA GGTGTATTTC TCCAAGAGGG AACGCATGCT
ATCAGCATAA GCGGTGGTGT GCCGGGAGTC CAGTTTTACG GTTTTAGGGT TTGCAGTGGA
TTTTCGGAGT ATCCCTTTGC CGGTGAAGCC AGCTTTATGC TCTCTCCTCG TCGGTTCAAG
GATGTAAATG GTGTGATGGT TGAGCCGGAT CGAGGTTTTA AACTGACCTT TGAAATGTTG
CGAAGAAAAC CCGACTCGGC GCTTATTTGG TATGAGGATT TTCGAGACAG GAACATCCTG
CCTGAAAACT ACTGGACTGT GCTGGATGGC GAATGGGATG TTTGGCAAGA CCCAGACAGC
ACAGAAAACC GTCCATATTC CCAGCTCGAG GGATATGGCA AACTTGCATG GAAATACGAC
GGGTTTTCCG ATATTCATAT CCGGGCAAGG CTGGCTTTCC CTCAAAATAG CAGTGGACGG
GCTGGGGTGT TCCTTGGGGA TATTTTCTGC TGCTTAAATT ATGACACGCA AAGAGTCGAG
CTTTATCAAG GTAATTCCTT GCTTGGTAGC TATTCCACCA GTTTCTCAAA AACTGTAGAT
GCCGATCTTC GTGCTAATCC GAATATGTAT ACTATAGAGA TGCGAAAACG CGGCAATAAG
GTAAGAGTAT ATTCAGGTGC AGCTTCAACC CTGCGCTTCA CAGTGAATGT AACCGGTGGT
AGTGGTTATG TAGGTTACTG CTCGGACAAC CGGACGGTAT GCGAGCTGCT GCGACTGGGC
GATGCATGGG TATATGAACC ATACGAGCGT TTTGATGTGG AACTTCCGGA TGGAAATATA
ACCAGCTTTG GCAGGCTTGC TCGCACTGGT GTCACGTGGG ATGATGAATT TCAGGTGTTT
TCAGTAAATA ACGATGTGGA GGAATCGATA ACTCGCAGTG AGGACATTTC GATGGACTAT
GACTTCTTCC ACTCACAACT TTTGGCTCTT TCTTGCGGTA ATGACTATGA AGTAAAGATT
ATACTGAAAG ACATCAATAT CTGGATATCC CGTCTCTTCC TCGGAGATGC AGATGGTTTT
TCTATTCTGT ATTATCAGGA TGTGGACAGC CTTGTTTACT GGGCAAACGA AGCGGCTTAT
CGATGGAAAC TGCGAGGTAT AGCCATCTGG TCTCTTGGGC AGGAGGATAT GCGGTTGTGG
GAGGCGCTTC CGAAGCAAAT ATAG
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| Protein sequence | MGNARMYEAL RDYGDRFDTV GIFTFEVDET GTITETGTSI SSMLPYIQKW PHIKWLLTIM
NHGIANIFTA LRNNENGAKD KFLTEIIRIM NKYPWCAGVD IDLERGGGYE NKDAANALFR
DIYNTVKSYD ATKLVNICLP GMIGVQGSVG GENWCVYADL NDYCDTAAIM SYGMAWAGSA
PGPVSPRDWL EGIYDYAVSV MSPDKIFMGL PAYGWNWRIH DTPENLGITY RGVSNTYYAA
KYWMTGVYNF TGDAPPQPFI PIVAYWDDYN KVPWALPHVY DYMEGWDAVS WEYPLLKGVY
NRRRYLTSYG KEQKAEFGTI YIDRNGVPDE YEGNVIITDE MTSLGDAQAS AEYRFEIREA
GYYDIAVQLC FPYWDKNAII VSLDGISKTF SENRLWWPYW RRVCWLTLAK GVFLQEGTHA
ISISGGVPGV QFYGFRVCSG FSEYPFAGEA SFMLSPRRFK DVNGVMVEPD RGFKLTFEML
RRKPDSALIW YEDFRDRNIL PENYWTVLDG EWDVWQDPDS TENRPYSQLE GYGKLAWKYD
GFSDIHIRAR LAFPQNSSGR AGVFLGDIFC CLNYDTQRVE LYQGNSLLGS YSTSFSKTVD
ADLRANPNMY TIEMRKRGNK VRVYSGAAST LRFTVNVTGG SGYVGYCSDN RTVCELLRLG
DAWVYEPYER FDVELPDGNI TSFGRLARTG VTWDDEFQVF SVNNDVEESI TRSEDISMDY
DFFHSQLLAL SCGNDYEVKI ILKDINIWIS RLFLGDADGF SILYYQDVDS LVYWANEAAY
RWKLRGIAIW SLGQEDMRLW EALPKQI
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