| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1612 |
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| Symbol | |
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| ID | 4809307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1941838 |
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| End bp | 1942257 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640107028 |
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| Product | toxin secretion/phage lysis holin |
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| Protein accession | YP_001038029 |
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| Protein GI | 125974119 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4824] Phage-related holin (Lysis protein) |
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| TIGRFAM ID | [TIGR01593] toxin secretion/phage lysis holin |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000571336 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACAG TATGGAACTG GGCGCAGGCG GTTTTTACTG CTATTGGCGG ATTTCTTGGC
TGGTTTCTTG GAGGGCTGGA TGGATTTTTA TATGCACTCA TCGCTTTTGT AGCCATTGAC
TATGTGACCG GAGTGATGTG TGCCGTTGTA GACAGAAAGC TTTCGAGTGA AGTCGGAGCC
AAGGGCATCT TTAAGAAAGT GCTTATATTT GTACTTGTGG GTGTGGGACA CATAATCGAC
AGCCAGGTTC TCGGCAACGG AGGGGCAATC CGGACAGCGG TGATTTTCTT TTACCTGAGT
AACGAGGGAA TTTCAATTCT TGAGAATGCA GCACATATAG GACTGCCCAT TCCTGAAAAG
CTGAAGAACG CATTGGAACA ACTGCATGGC CACTCAAATG AGGAGGATGA AAAGAAATGA
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| Protein sequence | MKTVWNWAQA VFTAIGGFLG WFLGGLDGFL YALIAFVAID YVTGVMCAVV DRKLSSEVGA
KGIFKKVLIF VLVGVGHIID SQVLGNGGAI RTAVIFFYLS NEGISILENA AHIGLPIPEK
LKNALEQLHG HSNEEDEKK
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