Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1587 |
Symbol | |
ID | 4809578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1917782 |
End bp | 1918885 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640107005 |
Product | ABC transporter related protein |
Protein accession | YP_001038006 |
Protein GI | 125974096 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTAG CTATCAGTAT AGAGAATGTT GTAAAGCGTT TTGGAAAAGA GACAGTTATA AACGGATTAT CATTGGAAAT AAAACCGGGA GAATTTTTTA CATTGCTTGG ACCGTCCGGT TGCGGAAAGA CCACGCTGCT TCGTATGATA ATCGGATTTA ATTCCATTGA AGGCGGACAG ATTAAAATTG ATGGGAAAGT AATAAATAAT ATTCCTACCA ATAAGAGAAA TATGGGTATG GTATTTCAAA ACTATGCGAT ATTTCCACAT ATGTCGGTTA AGGATAATAT AGCCTTTGGA TTGAAAAACA GGAAAGTACC CAAAGCTGAG ATTGAGAAAA GAGTAGATGA AATCTTAAAA ATTGTTAAGA TAGATCATTT AAAAGACCGA ATGCCGCACA AAATGTCCGG TGGACAACAA CAGCGTATTG CCCTGGCCAG AGCAATTGTT ATTCATCCTG AGGTTCTTTT GATGGATGAG CCTCTTTCCA ATTTGGACGC AAAACTGCGT ACAGAGATGC GAAACGCTAT AAAACAGATT CAGCAGCAGG TGGGGATTAC AACAGTGTAT GTAACCCACG ACCAGGAGGA AGCGTTGGCG GTATCTGACA GAATTGCAGT TATGAATGGC GGAGTAATTC AGCAGATTGA TACCCCTAAA AATATTTATC AGCGTCCGGC GAACACATTT GTTTCGACGT TTATTGGACT TTCCAACATA ATGGATGGAA AGCTTGAGAG CAATGAAAAC GGCAAAGCTT TAATAAGAAT TGGTGATTAT AAGTTTCAAA TGAATAATAT TAAAAAGGAC TGTGGCTCCA ATTGCCCTGT TAAAGTGTCG GTTCGACCTG AAGAGTTTAT TATTAACAAA GAAACCGAAG AAGGCATTCC GGTTACAGTG AAAAGCAGTG TTTTTCTTGG AGTTACAACC CATTATTTTG TTGAAACCAA AGAGGGGCAG GAGATAGAGG TAATACAAAG TTCAGATATT GGAGAAATAA TTCCAAACGG TAAGAAAGTT CATCTTAAAG TACAGGTGCA AAAAATAAAT GTGTTCAGTG AAGATGGCAG CAGAAGCTTT ATAGATAGGG AGGTCCGCCC ATGA
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Protein sequence | MSVAISIENV VKRFGKETVI NGLSLEIKPG EFFTLLGPSG CGKTTLLRMI IGFNSIEGGQ IKIDGKVINN IPTNKRNMGM VFQNYAIFPH MSVKDNIAFG LKNRKVPKAE IEKRVDEILK IVKIDHLKDR MPHKMSGGQQ QRIALARAIV IHPEVLLMDE PLSNLDAKLR TEMRNAIKQI QQQVGITTVY VTHDQEEALA VSDRIAVMNG GVIQQIDTPK NIYQRPANTF VSTFIGLSNI MDGKLESNEN GKALIRIGDY KFQMNNIKKD CGSNCPVKVS VRPEEFIINK ETEEGIPVTV KSSVFLGVTT HYFVETKEGQ EIEVIQSSDI GEIIPNGKKV HLKVQVQKIN VFSEDGSRSF IDREVRP
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