| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1580 |
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| Symbol | |
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| ID | 4809571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 1910020 |
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| End bp | 1911138 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640106998 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001037999 |
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| Protein GI | 125974089 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0212662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACA AAAACAACCA GAATAACAAG CCCTCTCAGA ATATTTTGAA AATTAAAGCA
CAAAGACTAA TTCATCAAAA TGCCCTATAT ACCATTATTG CTATTTTCTT CGGATTTCTG
GTCGGCGGCA TTTTCCTGTG GGCAGCCGGC TTCAGTCCCA TTGAAGCATA TGCAAAGCTG
TTCAGCAGCG TGTTCAGCCG TCCCAAATAT CTCATTTGGT CGGTGATCTA TGCAACTCCG
CTGATATTTA CGGGGTTAAG CGTGGCATTT TCTTACAAAA TGGGTGTTTT CAACATCGGC
GCCGAAGGGC AGTTTGTTGT AGGCTCACTG GCTGCTCTGT GCGTAGGCAT CCTGGTGGAC
GCTCCTCCCG GGTTGCACGT GCTGCTATGT ATGCTGGCCG CTGTTGCCGC CGGCATGCTG
TGGAGCTTTC TGGTGGCAGT GCTGCGCGTC CGGTTCGGTA TCAATGAAGT TTTGTCCTTC
ATTATGTTCA ACTGGATCGC CTTTTATTTT TCAAATTATG TAGTCAATAC TGCAGCTATT
CACAAGGTTG GCGGCGGAGA GGCTTCCAAG GATATTCGCG AATCTGCAAG AATTCTGCTG
CCCCAATCGT TGCAGAATAT TTTTCAGAGT AATAAAGCCA ACTACGGTAT TTTCCTGGCA
ATTATTGCGG CAATTGTTAT TTGGTTTATC CTGACGAAAA CCACTCTTGG CTATAAAGTA
CAGGCCGTTG GTCTCAATCC TCACGCAGCC AAATACGGCG GTATTAATTC CAACAAGACG
ATGTATATTG CCATGAGCCT GTCGGGTGCT CTGGCAGCTT TGGGCGGTGC CGTGCAACTG
ATGGGTAACT CCATGCGCAT CAGTCAGTTT GCCGGACAGG AAGGCTTCGG CTTCCAGGGA
ATCACCGTTG CGTTAATCGC AAGCTCTCAC CCTATTGGTT GTATTTTTTC AGGGCTGTTT
TACGGTGCCA TGAAATACGG CGGCTCCAAG CTCAATCTAA TTGATGCTCC CACAGAAGTC
GTTGACATCA TTATGGGCAC CATCGTGCTC TTTATCGCCA TATCACATGT ATTCCGCTAT
TTAATTACAA GACGGCTTAA GAATAAGGAG GACAAATAA
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| Protein sequence | MKHKNNQNNK PSQNILKIKA QRLIHQNALY TIIAIFFGFL VGGIFLWAAG FSPIEAYAKL
FSSVFSRPKY LIWSVIYATP LIFTGLSVAF SYKMGVFNIG AEGQFVVGSL AALCVGILVD
APPGLHVLLC MLAAVAAGML WSFLVAVLRV RFGINEVLSF IMFNWIAFYF SNYVVNTAAI
HKVGGGEASK DIRESARILL PQSLQNIFQS NKANYGIFLA IIAAIVIWFI LTKTTLGYKV
QAVGLNPHAA KYGGINSNKT MYIAMSLSGA LAALGGAVQL MGNSMRISQF AGQEGFGFQG
ITVALIASSH PIGCIFSGLF YGAMKYGGSK LNLIDAPTEV VDIIMGTIVL FIAISHVFRY
LITRRLKNKE DK
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