| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1530 |
|---|
| Symbol | |
|---|
| ID | 4810568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1856063 |
|---|
| End bp | 1856503 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640106949 |
|---|
| Product | transposase, IS204/IS1001/IS1096/IS1165 |
|---|
| Protein accession | YP_001037950 |
|---|
| Protein GI | 125974040 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3464] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGT TTATTAAACA ATTAGATCCA AACTTAGACT ATATTAATCA TGAAATAAAT
GATGGCAAAT GCTATATAAC AGTAGCTTCC AACCGCAAAG AAGTAACATG TCCATTTTGC
GGCCAGTCAT CATCCAGAAT ACATTCCACC TACAACAGAA TTTTTCAGGA CCTTCCAATA
CAAGGTAATA AGGTATTTAT TATTATACGT AACAGAAAAA TGTTTTGTGA TAATCCTGAT
TGTAGTCATA CTACTTTTGC AGAAAGATTT GATTTTATCT CCTATAAAGC GAAGAAAACC
CGTCGTCTTG AGGATGAAAT TGTACGACTG TCAATAAATT GCAGTTCCGT TGCAGCATCA
AAAGCTCTAA AGGAAAATGT TGTGGATATC GGTAAAAGTA CAGTTTGCAA TCTCTTAAAA
AAAAGAAACA CCGGTTGTTG A
|
|---|
| Protein sequence | MDKFIKQLDP NLDYINHEIN DGKCYITVAS NRKEVTCPFC GQSSSRIHST YNRIFQDLPI
QGNKVFIIIR NRKMFCDNPD CSHTTFAERF DFISYKAKKT RRLEDEIVRL SINCSSVAAS
KALKENVVDI GKSTVCNLLK KRNTGC
|
|---|
| |