Gene Cthe_1523 details

Gene Information

• Locus tag: Cthe_1523
• ID: 4810561
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 1846955
• End bp: 1848835
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640106943
• Product: glycosyl transferase, group 1
• Protein accession: YP_001037944
• Protein GI: 125974034
• COG category: [I] Lipid transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase; [COG0438] Glycosyltransferase
• TIGRFAM ID: [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTATTTT TGTTGACGGT TTTCTTTTTT GTATTTGAAA AATTAAAAGT AAATGCGGCA 
AGAAAAGAGA GAGGAGTCAA ATTTCTGATG ATTATTACAC TGGTAAATGA CACCTTTAAC 
ATAAACAACA ACGGGACCAC CATTTCTGCA ATGCGTTTTG CCGAGGCACT GTCACAACGC 
GGCCACCAAA TCCGCATAAT TACATGCGGT GATCCTTTAA AAAGCGGCAA AGACCCTGAT 
ACCGGTTTCG AAATGTTTTA TCTGCCGGAA CTCAAAATCC CCATTGCAAG CAGGCTGGCC 
CACAAGCAGA ATACACTGTT TGCAAAGCCG GTTCGCTCCA TTTTGAAAAA AGCAATCTCA 
GGGTCCGATG TTGTGCATAT ATATCAACCC TGGCCGCTTG GAAGCGCAGC CCAAAGAGTT 
GCCAGGCAAA TGAACATCCC TGCAATCGCA GCTTTTCACA TACAACCTGA AAACATTACC 
TTCAATATAG GTCTTAAGCG GTTTTCTCCG GCTGCCCATT TGACATATTT TTTGTTCTAC 
CTGTTTTTCT ATCGCAGATT TTCACATATC CACTGCCCGT CAAAATTTAT TGCCGCGCAG 
CTCAGGAGCC ACGGATACAA AGCACGGTTG CACGTCATCT CAAACGGCGT CCATCCGGCA 
TTTTGTGCTC CCGCAAAGCC CAGGGAACAT ACTTTCAAAC CAATTAAGAT ACTTATGATT 
GGCAGGCTTT CTCCCGAAAA AAGGCAGGAT GTTCTGATTC GTGCCGTCAT GAAATCCCGT 
TATGCCGATC GTATTCAGCT GTATTTTGCC GGAAGCGGCC CCTGGGAGAA GAAACTTCGC 
CGTCTTGGAA ACAAACTCCC CAATCCTCCT GTGTTTGGGT ATTACAATCG TGACGAGCTG 
ATTAAGCTCA TACACGAATG CGACTTGTAT GTACACGCCT CAGATGCGGA AATTGAAGGC 
ATCTCATTAA TTGAGGCGTT CGCATGCGGG CTGGTTCCGA TAATCTCCGA CAGCAAACAG 
AGTGCCGCGG CGCAGTTTGC ACTCGGTCCC CAGAATCTTT TCAAAGCAGG GTCCCCTGAA 
TCATTGGCGG AAAAAATCGA TTACTGGCTG GACCATCCGG AACAGCTGAA AGAAGCTGAA 
AAGAAATATG CTCAATTAGG AAAGCAATAC GCCCTGGAAC ACAGTATCAG AAAAATAGAA 
AAAGTATATT CATCCATGAC AAAAAATCAT AAAAATGAAT ACCATCGCAG TATTTTTTTC 
AGACTATCCA CCCGCTTGTT CCAAATTGTA ATAGCCTGTC CCATCCTGCT GCTGTGGACA 
CGTTTTGTTT TAGGTGCCAA AGTCTATGGC AGGGAAAATA TCCGTGGCCT CAAAAGTGGG 
GTTACGGTAT GCAACCATGT CCACCTGCTG GACAGCGCTT TAATTGGCGT AACGTTTTTC 
CCACGCAGGG TTGTTTTTCC CACACTCACC CAGAACGTAA AAACGCTCTG GCCGGGCAAG 
CTTGTGCGAA TACTTGGCGG GTTTGCCATA CCTGATAATA TTATGGAGCT CAAAGCCTTT 
TTTGACGAGA TGGAGTTTCT TTTGATGAAA AACTGTATCG TGCATTTTTT TCCCGAAGGG 
GAATTAAGAC CCTATGATAC CGGTTTGCAA AACTTCAAAA AAGGGGCATT TTATCTTGCG 
GCACAGGCTC AAGTGCCAAT TGTCCCTATG TTAATCACCT TTGAACCTCC AAAAGGACTG 
ATAAAAATCA TACGAAAAAA GCCGGTTATG CGTCTTCATA TAGGAAAGCC AATACACCCG 
ATGTCCAAGG ATATCGAAAT CGACTCAGAA CTTAGAATGA AAGCGGTCTG CAAAAAAATA 
GAAGCCATTA CTTCCGTGTA A 

 

Protein sequence

MLFLLTVFFF VFEKLKVNAA RKERGVKFLM IITLVNDTFN INNNGTTISA MRFAEALSQR 
GHQIRIITCG DPLKSGKDPD TGFEMFYLPE LKIPIASRLA HKQNTLFAKP VRSILKKAIS 
GSDVVHIYQP WPLGSAAQRV ARQMNIPAIA AFHIQPENIT FNIGLKRFSP AAHLTYFLFY 
LFFYRRFSHI HCPSKFIAAQ LRSHGYKARL HVISNGVHPA FCAPAKPREH TFKPIKILMI 
GRLSPEKRQD VLIRAVMKSR YADRIQLYFA GSGPWEKKLR RLGNKLPNPP VFGYYNRDEL 
IKLIHECDLY VHASDAEIEG ISLIEAFACG LVPIISDSKQ SAAAQFALGP QNLFKAGSPE 
SLAEKIDYWL DHPEQLKEAE KKYAQLGKQY ALEHSIRKIE KVYSSMTKNH KNEYHRSIFF 
RLSTRLFQIV IACPILLLWT RFVLGAKVYG RENIRGLKSG VTVCNHVHLL DSALIGVTFF 
PRRVVFPTLT QNVKTLWPGK LVRILGGFAI PDNIMELKAF FDEMEFLLMK NCIVHFFPEG 
ELRPYDTGLQ NFKKGAFYLA AQAQVPIVPM LITFEPPKGL IKIIRKKPVM RLHIGKPIHP 
MSKDIEIDSE LRMKAVCKKI EAITSV